Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0228 lasB-F GAAGGTTTCTACGCTTGACCTGTTGTTCGT Pseudomonas aeruginosa lasB gene \ 2024 Bacterium
RPB0228 lasB-R GTTGTGGAATTGCTCGTAGCGGGTGACCTG Pseudomonas aeruginosa lasB gene \ 2024 Bacterium
RPB0229 RSV-F2 CAGGATTGTTTATGAATGCCTATGGTKCAGG RSV N protein gene \ 2024 Virus
RPB0229 RSV-R2 GGTGTACCTCTRTAYTCTCCCATTATGCCTA RSV N protein gene \ 2024 Virus
RPB0230 ADV-F4 TGGCGCATHCCATTCTCCAGCAACTTYATGTC AdV Hexon protein gene \ 2024 Virus
RPB0230 ADV-R4 CGCAGGTAWACGGCCTCGATGACGCCGCG AdV Hexon protein gene \ 2024 Virus
RPB0231 RPA-H1N1-F TAAGAGAGCAATTGAGCTCAGTGTCA Influenza A virus (H1N1) \ \ 2024 Virus
RPB0231 RPA-H1N1-R TGCTGAGCTTTGGGTATGAATTTCCTTT Influenza A virus (H1N1) \ \ 2024 Virus
RPB0232 RPA-H3N2-F CCTTAGGTCACTAGTTGCCTCATCCGGC Influenza A virus (H3N2) \ \ 2024 Virus
RPB0232 RPA-H3N2-R TCCTGATGCTTGAGCATATAGGCTGATT Influenza A virus (H3N2) \ \ 2024 Virus
RPB0233 RPA-SARS-CoV-2-F GATTGAACCAGCTTGAGAGCAAAAT SARS-CoV-2 \ \ 2024 Virus
RPB0233 RPA-SARS-CoV-2-R ATTTCCTTGGGTTTGTTCTGGACCACGT SARS-CoV-2 \ \ 2024 Virus
RPB0234 SARS-CoV-2 WT forward PCR primer GGGAGCCTTGAATACACCAAAA SARS-CoV-2 Nucleocapsid N3 gene NC_045512.2 2024 Virus
RPB0234 SARS-CoV-2 WT reverse PCR primer GAAGTTGTAGCACGATTGCAG SARS-CoV-2 Nucleocapsid N3 gene NC_045512.2 2024 Virus
RPB0235 HMPV-F1 ATGTCTCTTCAAGGGATTCACCTRAGTG HMPV nucleoprotein (N) gene \ 2024 Virus
RPB0235 HMPV-R1 ATYCCTATYTCTGCAGCATATTTGTAATC HMPV nucleoprotein (N) gene \ 2024 Virus
RPB0236 F CTTATCCACCACATGGGAGCCAGGAGTTCC HAdV HAdV B 1A(E1A)gene \ 2024 Virus
RPB0236 R BIOTIN-TGCTCATGAACATGGCCAGATCGCACATTTCAG HAdV HAdV B 1A(E1A)gene \ 2024 Virus
RPB0236 P FAM-ACTGTCTCTGTCCGAGGTCCTGACGGTTCC[THF]TCCCATTAGTAACAAC-C3-SPACER HAdV HAdV B 1A(E1A)gene \ 2024 Virus
RPB0237 RAA-F AATTCTAATACGACTCACTATAGGAGATGCACCGTCGAACGGCTGATGACCAAAC Mycobacterium tuberculosis IS6110 genes \ 2024 Bacterium
RPB0237 RAA-R CCAGGTCGACACATAGGTGAGGTCTGCTACCCACA Mycobacterium tuberculosis IS6110 genes \ 2024 Bacterium
RPB0238 KPC-RAA-F2 AATTCTAATACGACTCACTATAGGGACCCATCCGTTACGGCAAAAATGCGCTGGT Klebsiella pneumoniae blaKPC gene \ 2024 Bacterium
RPB0238 KPC-RAA-R2 CGGCGTTATCACTGTATTGCACGGCGGCC Klebsiella pneumoniae blaKPC gene \ 2024 Bacterium
RPB0239 NDM-RAA-F2 AATTCTAATACGACTCACTATAGGGTGRRCGCGCTGCATGCGGCGGGGATTGCGA Klebsiella pneumoniae blaNDM gene \ 2024 Bacterium
RPB0239 NDM-RAA-R2 CCATTGGCGGCGAAAGTCAGGCTGTGTTGC Klebsiella pneumoniae blaNDM gene \ 2024 Bacterium
RPB0240 SARS-2 FP CAACTTCCTCAAGGAACAACATTGCCAAAA SARS-CoV-2 SARS-CoV-2 N gene \ 2024 Virus
RPB0240 SARS-2 RP TGGAGTTGAATTTCTTGAACTGTTGCGACT SARS-CoV-2 SARS-CoV-2 N gene \ 2024 Virus
RPB0241 nuc-F3 GTAGCTTCAAGTCTAAGTAGCTCAGCAAAT Staphylococcus aureus nuc gene BX571856.1 2024 Bacterium
RPB0241 nuc-R3 GGTGTATCAACCAATAATAGTCTGAATGTC Staphylococcus aureus nuc gene BX571856.1 2024 Bacterium
RPB0241 nuc-Probe 1 FAM-AACCCTGAATATCCAACAGTCGCGCTGTA-BHQ1 Staphylococcus aureus nuc gene BX571856.1 2024 Bacterium
RPB0242 mecA-F3 GAGCAGAGGTTCTTTTTTATCTTCGGTT Staphylococcus aureus mecA gene BX571856.1 2024 Bacterium
RPB0242 mecA-R3 ATGGCTATCGTGTCACAATCGTTGACGA Staphylococcus aureus mecA gene BX571856.1 2024 Bacterium
RPB0242 mecA-Probe 3 ROX-TCATGCCATACATAAATGGATAGACGTCATATGAAGGTGTTGGCATGA-BHQ2 Staphylococcus aureus mecA gene BX571856.1 2024 Bacterium
RPB0243 Meas_NS1 CAAAGGCGGTTACGGCYCCAGACACRGCAGCTGAT Measles morbillivirus N region NC_001498 2024 Virus
RPB0243 Meas_NR1 ACCACATCCAACCATTTTCTCTCCAATCTAAATTC Measles morbillivirus N region NC_001498 2024 Virus
RPB0243 Meas_Probe AATCTAAATTCACCAACTACCCTTCTTTGT(dT-FAM)G(THF)G(dT-BHQ)GTAYTTTATCCACC-(C3) Measles morbillivirus N region NC_001498 2024 Virus
RPB0244 F TCAATGGTAGCTCTTGTATCAGCCACAATGG Streptococcus pyogenes M1 GAS sdaB gene \ 2024 Bacterium
RPB0244 R AAAGAGTGCTGGAGTAATCTGACTAGTACCT Streptococcus pyogenes M1 GAS sdaB gene \ 2024 Bacterium
RPB0245 F CACTGTACCTATTGTTGTGATTGTGCTCA Klebsiella pneumoniae P1 gene CP039761.1 2024 Bacterium
RPB0245 R ATTTCCTTAAAGACACTACCAACCGCTTT Klebsiella pneumoniae P1 gene CP039761.1 2024 Bacterium
RPB0246 \ \ Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0246 \ \ Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0247 SARS-CoV-2 forward AAGCCTCTTCTCGTTCCTCATCACGTAG SARS-CoV-2 (N) gene NC_045512 2024 Virus
RPB0247 SARS-CoV-2 reverse GTTGGCCTTTACCAGACATTTTGCTCTCA SARS-CoV-2 (N) gene NC_045512 2024 Virus
RPB0247 SARS-CoV-2 probe GGCGGTGATGCTGCTCTTGCTTTGCTGC-[T(FAM)]-G-dSpacer-[T(BHQ1)]-TGACAGATTGAACCAGC-Spacer C3 SARS-CoV-2 (N) gene NC_045512 2024 Virus
RPB0248 F2 AAAAACTTTCAACAATGGATCTCTTGGCTC Pneumocystis jirovecii 5.8 S ribosomal RNA \ 2024 Fungus
RPB0248 R1 TCAGACTAGCATGCATATAAATATTTTATT Pneumocystis jirovecii 5.8 S ribosomal RNA \ 2024 Fungus
RPB0249 mexX-RPA-F3 TAATACGACTCACTATAGGGCTGATCCGTACCGCCCAGTCCGCCGTGGTC Pseudomonas aeruginosa mexX gene \ 2024 Bacterium
RPB0249 mexX-RPA-R3 CGGCATGCTGGGCGGCGTTCTCGACGATC Pseudomonas aeruginosa mexX gene \ 2024 Bacterium
RPB0250 rcsA-F ACCCGGCGACGCTGTTTGTTATCTTTATGT Klebsiella pneumoniae rcsA gene AY059955.1 2024 Bacterium