Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0001 F TTCCAATTAACACCAATAGCAGTCCAGATG SARS-CoV-2 N \ 2023 virus
RPB0001 R ATATGATGCCGTCTTTGTTAGCACCATAGG SARS-CoV-2 N \ 2023 virus
RPB0002 F CGTTACTATATAGATCATCCGAGTCCTAAA SARS-CoV-2 ORF1ab \ 2023 virus
RPB0002 R CACAACTACAGCCATAACCTTTCCACATAC SARS-CoV-2 ORF1ab \ 2023 virus
RPB0003 F GGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N \ 2023 virus
RPB0003 R AGACATTTTGCTCTCAAGCTG SARS-CoV-2 N \ 2023 virus
RPB0004 F GAACGTGGTTGACCTACACAGGTGCCATCAAAT SARS-CoV-2 N OP714083.1 2023 virus
RPB0004 R BIOTIN-GGTAAGGCTTGAGTTTCATCAGCCTTCTTCTTTT SARS-CoV-2 N OP714083.1 2023 virus
RPB0004 P FITC-ACAAAGATCCAAATTTCAAAGATCAAGTCA[THF]TTTGCTGAATAAGCA-C3 SARS-CoV-2 N OP714083.1 2023 virus
RPB0005 F TCTTAGGGAATTTGTGTTTAAGAATATTGATGG SARS-CoV-2 S OP711808.1 2023 virus
RPB0005 R Biotin-TATGTAAAGCAAGTAAAGTTTGAAACCTAGTG SARS-CoV-2 S OP711808.1 2023 virus
RPB0005 P FITC-ACACGCCTATTATAGTGCGTGAGCCAGAA[THF]ATCTCCCTCAGGGTTT-C3 SARS-CoV-2 S OP711808.1 2023 virus
RPB0006 F TGTTTGATAGTCACATTGTTTCCAAAGAGT HCoV-229E \ \ 2023 virus
RPB0006 R TTGAATTCTAGTGCACTAGGGTTAAGAAGA HCoV-229E \ \ 2023 virus
RPB0006 P GGCAACACTGTGGTCTTGACTTTCACTACT[FAM-DT]A[THF]A[BHQ1-DT]GTGACTGTGCCCAAA[C3-SPACER] HCoV-229E \ \ 2023 virus
RPB0007 F TGCTGGCATTGGTTTACATTTAAAAGTTAATT HCoV-OC43 \ \ 2023 virus
RPB0007 R AATCTTTTACACGCTCATAGCATTTCATCT HCoV-OC43 \ \ 2023 virus
RPB0007 P TCAGCGTGTTGATGAGAACGGTGATAAATT[TAMRA-DT]A[THF]A[BHQ-DT]TCAGTTCTTTGTTGT HCoV-OC43 \ \ 2023 virus
RPB0008 F CGTTATTCTTTGATAGTGAGGTTAGCACTG HCoV-NL63 \ \ 2023 virus
RPB0008 R TCTGCTCAATGAACTTAGGAAGGTTCTTAT HCoV-NL63 \ \ 2023 virus
RPB0008 P GTGGGTGATAATGTTCAGATTACCTATACC[CY5-DT]A[THF]A[BHQ2-DT]AATGCTTGTAGCTAA HCoV-NL63 \ \ 2023 virus
RPB0009 F GCTGGTAGCAGAACTCGAAGGCATTCAGTAC SARS-CoV-2 ORF1a_L \ 2023 virus
RPB0009 R ACCAGCTCCTTTATTACCGTTCTTACGAAGA SARS-CoV-2 ORF1a_L \ 2023 virus
RPB0010 F GCATTCAGTACGGTCGTAGTGGTGAGACACT SARS-CoV-2 ORF1a_S \ 2023 virus
RPB0010 R TCTTACGAAGAAGAACCTTGCGGTAAGCCAC SARS-CoV-2 ORF1a_S \ 2023 virus
RPB0011 F ATGTCTGATAATGGACCCCAAAATCAGCGA SARS-CoV-2 N1_L \ 2023 virus
RPB0011 R AAACCTTGGGGCCGACGTTGTTTTGATCGCG SARS-CoV-2 N1_L \ 2023 virus
RPB0012 F AAAATCAGCGAAATGCACCCCGCATTACGTT SARS-CoV-2 N1_S \ 2023 virus
RPB0012 R TTTTGATCGCGCCCCACTGCGTTCTCCATTC SARS-CoV-2 N1_S \ 2023 virus
RPB0013 F ACACCGGAAGCCAATATGGATCAAGAATCC SARS-CoV-2 ORF1ab \ 2023 virus
RPB0013 R ACCCACAGGGTCATTAGCACAAGTTGTAGG SARS-CoV-2 ORF1ab \ 2023 virus
RPB0013 P ATCGTGTTGTCTGTACTGCCGTTGCCACA/i6FAMdT/A/idSp/A/iBHQ1dT/CATCCAAATCCTAAAGG SARS-CoV-2 ORF1ab \ 2023 virus
RPB0014 F CAGCAGTAGGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N \ 2023 virus
RPB0014 R GGCCTTTACCAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N \ 2023 virus
RPB0014 P CTGGCAATGGCGGTGATGCTGCTCTTGCTT[HEX-dT]G[THF][BHQ1-dT]GCTGCTTGACAGATTGTGTGCAACTTTAG[phosphate] SARS-CoV-2 N \ 2023 virus
RPB0015 F CCTACAACTTGTGCTAATGACCCTGTGGGTTTTACACTT SARS-CoV-2 ORF1ab \ 2023 virus
RPB0015 R CACCGCAAACCCGTTTAAAAACGATTGTGC SARS-CoV-2 ORF1ab \ 2023 virus
RPB0015 P ACACAGTCTGTACCGTCTGCGGTATGTGGAAAGG[HEX-dT][THF]A[BHQ1-dT]GGCTGTAGTTGTGATCAAC[phosphate] SARS-CoV-2 ORF1ab \ 2023 virus
RPB0016 F GAAGAGACAGGTACGTTAATAGTTAATAGCGTA SARS-CoV-2 E \ 2023 virus
RPB0016 R AAAAAGAAGGTTTTACAAGACTCACGTTAACA SARS-CoV-2 E \ 2023 virus
RPB0016 P ATCGAAGCGCAGTAAGGATGGCTAG[HEX-dT][THF][BHQ1-dT]AACTAGCAAGAATAC[phosphate] SARS-CoV-2 E \ 2023 virus
RPB0017 F ACTACCGAAGAGCTACCAGACGAAT SARS-CoV-2 N MN985325.1 2023 virus
RPB0017 R GCCTTTACCAGACATTTTGCTCTCA SARS-CoV-2 N MN985325.1 2023 virus
RPB0017 P GGTGATGCTGCTCTTGCTTTGCTGCTGCTTGACAGATTGAACCA SARS-CoV-2 N MN985325.1 2023 virus
RPB0018 F TGCTGCTAGAGACCTCATTTGTGCAC SARS-CoV-2 S MN985325.1 2023 virus
RPB0018 R AAAGCTTGTGCATTTTGGTTGACCAC SARS-CoV-2 S MN985325.1 2023 virus
RPB0018 P AACGGCCTTACTGTTTTGCCACCTTTGTCACAGATGAAATGA SARS-CoV-2 S MN985325.1 2023 virus
RPB0019 F AACACAAGCTTTCGGCAGACGTGGTCCAGAACAAAC SARS-CoV-2 N \ 2023 virus
RPB0019 R GAAATTTGGATCTTTGTCATCCAATTTGATGGCAC SARS-CoV-2 N \ 2023 virus
RPB0020 F TCTGATAATGGACCCCAAAATCAGCGAAAT SARS-CoV-2 N \ 2023 virus