Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0205 F FITC-AGTGCGTTGTTCGTTCT SARS-CoV-2 N-gene \ 2022 Virus
RPB0205 R CATTCTGCTTCCAAGT-/C12/-TTTGATCGCGCCCCACTG SARS-CoV-2 N-gene \ 2022 Virus
RPB0206 CYP2C19*2-F TTTATAGTTTTAAATTACAACCAGAG CTTGGC SARS-CoV-2 CYP2C19*2 \ 2022 Virus
RPB0206 CYP2C19*2-R ATGTCCATCGATTCTTGGTGTTCTTTTACTTT SARS-CoV-2 CYP2C19*2 \ 2022 Virus
RPB0207 CYP2C19*3-F GCTGTGCTCCCTGCAATGTGATCTGCTCCATTATT SARS-CoV-2 CYP2C19*3 \ 2022 Virus
RPB0207 CYP2C19*3-R TTGGTCAATATAGAATTTTGGATTTCCCAGAAAAA SARS-CoV-2 CYP2C19*3 \ 2022 Virus
RPB0208 A570D-F TGAGTCTAACAAAAAGTTTCTGCCTTT CCAACA SARS-CoV-2 A570D \ 2022 Virus
RPB0208 A570D-R TGTAATGTCAAGAATCTCAAGTGTCTG TGGATCA SARS-CoV-2 A570D \ 2022 Virus
RPB0209 D80A-F CCAATGTTACTTGGTTCCTGCTATACA TGTCTC SARS-CoV-2 D80A \ 2022 Virus
RPB0209 D80A-R ACTTCTCAGTGGAAGCAAAATAAACA CCATCA SARS-CoV-2 D80A \ 2022 Virus
RPB0210 T473K-F GCTGCGTTATAGCTTGGAATTCTAA CAATCTTGAT SARS-CoV-2 T473K \ 2022 Virus
RPB0210 T473K-R TGGGTTGGAAACCATATGATTGTAA AGGAAAGT SARS-CoV-2 T473K \ 2022 Virus
RPB0211 F ATACACTAATTCTTTCACACGTGGTGTTTA SARS-CoV-2 \ \ 2022 Virus
RPB0211 R AGTAGCGTTATTAACAATAAGTAGGGACTGGG SARS-CoV-2 \ \ 2022 Virus
RPB0212 F AGGTTTCAAACTTTACTTGCTTTACATAGA SARS-CoV-2 S gene \ 2021 Virus
RPB0212 R TCCTAGGTTGAAGATAACCCACATAATAAG SARS-CoV-2 S gene \ 2021 Virus
RPB0213 1F+4 CACATTGGCACCCGCAATCCTGC SARS-CoV-2 nucleocapsid phosphoprotein gene \ 2021 Virus
RPB0213 1R+8 GAGGAACGAGAAGAGGCTTGACTGCCGC SARS-CoV-2 nucleocapsid phosphoprotein gene \ 2021 Virus
RPB0214 2F-15 AAATGTCTGATAATG GACCCCAAAATCAGCGAAAT SARS-CoV-2 ORF8 protein gene \ 2021 Virus
RPB0214 2R TCTGGTTACTGCCAGTTGAATCTG SARS-CoV-2 ORF8 protein gene \ 2021 Virus
RPB0214 2R-11 GCGTTCTCCATTCTGGTTACTGCCAGTTGAATCTG SARS-CoV-2 ORF8 protein gene \ 2021 Virus
RPB0215 F AGGCAGCAGTAGGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N gene \ 2021 Virus
RPB0215 R TTGGCCTTTACCAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N gene \ 2021 Virus
RPB0216 F AGGTTTCAAACTTTACTTGCTTTACATAGA SARS-CoV-2 S gene \ 2021 Virus
RPB0216 R TCCTAGGTTGAAGATAACCCACATAATAAG SARS-CoV-2 S gene \ 2021 Virus
RPB0217 N-F GGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N gene \ 2021 Virus
RPB0217 N-R CAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N gene \ 2021 Virus
RPB0218 RdRP-F GTGARATGGTCATGTGTGGCGG SARS-CoV-2 RdRP gene \ 2021 Virus
RPB0218 RdRP-R CARATGTTAAASACACTATTAGCATA SARS-CoV-2 RdRP gene \ 2021 Virus
RPB0219 oprD-F CCTGACTTTCATGGTCCGCTATATCAATGG Pseudomonas aeruginosa oprD gene NC_002516 2024 Bacterium
RPB0219 oprD-R CGTTCGTGGTGCTTTGGTTGGAGCTTCGGTTC Pseudomonas aeruginosa oprD gene NC_002516 2024 Bacterium
RPB0219 oprD-P TGGCACCAAGATGTCTGACAACAACGTCGGCIFAM-dT][THF][BHQ-dTAAGAACTACG [3'block] Pseudomonas aeruginosa oprD gene NC_002516 2024 Bacterium
RPB0220 arr-F TTCCCATCTCTCATGATAATTACAAGCAGG Pseudomonas aeruginosa arr gene NC_002516 2024 Bacterium
RPB0220 arr-R CGACTTGAACGATACAGTGACAGACCGGAGCT Pseudomonas aeruginosa arr gene NC_002516 2024 Bacterium
RPB0220 arr-P CATGTTAACATAGATGTCATAATCACACCCIFAM-dt[THF][BHQ-dt]AGGATAAAACCGCC [3'-block] Pseudomonas aeruginosa arr gene NC_002516 2024 Bacterium
RPB0221 speB-F CTTCTTCCGACTTGACGCACTAAACCCTTC Streptococcus pyogenes sepB NZ_LS483338 2024 Bacterium
RPB0221 speB-R TTGATGCCTACAACAGCACTTTGATAACCG Streptococcus pyogenes sepB NZ_LS483338 2024 Bacterium
RPB0221 speB-P FITCCTTCTTCCGACTTGACGCACTAATCCCTT[THF]GCTCTTGATAATGGT-C3spacer Streptococcus pyogenes sepB NZ_LS483338 2024 Bacterium
RPB0222 F for CPSIT_0429 CCGATGATATCTTCAAGCGTGTAAGGTTTA SARS-CoV-2 CPSIT_0429 NC_045512.2 2024 Virus
RPB0222 R for CPSIT_0429 GGCCATACTACTTGCTATAGCTGTGTTAAT SARS-CoV-2 CPSIT_0429 NC_045512.2 2024 Virus
RPB0223 F for D614G CACCAGGAACAAATACTTCTAACCAGGTTG SARS-CoV-2 D614G NC_045512.2 2024 Virus
RPB0223 R for D614G CATTAGAACCTGTAGAATAAACACGCCAAG SARS-CoV-2 D614G NC_045512.2 2024 Virus
RPB0224 F for R346T TCCAACCAACAGAATCTATTGTTAGATTTC SARS-CoV-2 R346T NC_045512.2 2024 Virus
RPB0224 R for R346T GCGGAATTATATAGGACAGAATAATCAGCA SARS-CoV-2 R346T NC_045512.2 2024 Virus
RPB0225 F for Q183E ATGTCTCTCAGCCTTTTCTTATTTGGACCTTG SARS-CoV-2 Q183E NC_045512.2 2024 Virus
RPB0225 R for Q183E GTGATGTTAATACCTATTGGCAAATCTACC SARS-CoV-2 Q183E NC_045512.2 2024 Virus
RPB0226 F for T1050N TGCTGGTGATTACATTTTCAGCTAACACCTG SARS-CoV-2 T1050N NC_045512.2 2024 Virus
RPB0226 R for T1050N CCAACTTCCCATGAAAGATGTAATTCTCTG SARS-CoV-2 T1050N NC_045512.2 2024 Virus
RPB0227 khe F CGGGATTGAGCGGGTAATAA Klebsiella pneumoniae khe gene \ 2024 Bacterium
RPB0227 khe R GATGAAACGACCTGATTGCATTC Klebsiella pneumoniae khe gene \ 2024 Bacterium