Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0275 SP-lytaF CAAGTCGGCGTGCAACCATATAGGCAAGTAC Streptococcus pneumoniae \ \ 2024 Bacterium
RPB0275 SP-lytaR CAACCGTTCCCAACAATGTGCGAGAAAAAAC Streptococcus pneumoniae \ \ 2024 Bacterium
RPB0276 S.A -F1 ACTAAAAAATTACATAAAGAACCTGCGACA Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0276 S.A -R1 GTCTGAATGTCATTGGTTGACCTTTGTACA Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0276 Nuc-P FAM-CAAGTCTAAGTAGCTCAGCAAATGCATCACA-BHQ1 Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0277 PA-F CAGGGCTATTGCGAGAACCACTACATCCATTC Pseudomonas aeruginosa \ \ 2024 Bacterium
RPB0277 PA-R GTGGGAATGCCGTCACGTTTTATTTGCGGAAC Pseudomonas aeruginosa \ \ 2024 Bacterium
RPB0278 SA-F TATATGACAGCAACACCACCGAAACAACTTCT Staphylococcus aureus \ \ 2024 Bacterium
RPB0278 SA-R CCAGTGTATAACGTTGATTATTAATTTGATCT Staphylococcus aureus \ \ 2024 Bacterium
RPB0279 oprL-F ATGGAAATGCTGAAATTCGGC Pseudomonas aeruginosa oprL gene \ 2024 Bacterium
RPB0279 oprL-R CTTCTTCCAGCTCGACGCGACG Pseudomonas aeruginosa oprL gene \ 2024 Bacterium
RPB0280 PJ-RPA-7F GGTGAACAGGTGAGTAAAGATAGAAATC Pneumocystis jirovecii mtSSU rRNA gene JX499143 2025 Fungus
RPB0280 PJ-RPA-7R TCATTCTTTCAAATATAACTAGGGTTCTTAGG Pneumocystis jirovecii mtSSU rRNA gene JX499143 2025 Fungus
RPB0281 IS6110_cr5_F TGGCCACCTCGATGCCCTCACGGTTCAGGGTTAGCCACAC Mycobacterium tuberculosis IS6110 \ 2025 Bacterium
RPB0281 IS6110_cr5_R GCGAACTCAAGGAGCACATCAGCCGCGTCCACGCCGCCAA Mycobacterium tuberculosis IS6110 \ 2025 Bacterium
RPB0281 C13_FwT7_IS6_sg5 CCACCTCGATGCCCTCACGGTTCAGGGTTAGCCA Mycobacterium tuberculosis IS6110 \ 2025 Bacterium
RPB0282 C13_Rv_IS6_B GCGAACTCAAGGAGCACATCAGCCGCGTCCACGCCGCCAA Mycobacterium tuberculosis IS1081 \ 2025 Bacterium
RPB0282 C13_FwT7_IS1_A CGCCTCTACGGCTTCGTCGAGCTCTTTGGCCATG Mycobacterium tuberculosis IS1081 \ 2025 Bacterium
RPB0282 C13_Rv_IS1_A ACTCGCCGGATGGAGCGCCTGGTCGAAACACTTGGTGTGA Mycobacterium tuberculosis IS1081 \ 2025 Bacterium
RPB0283 rcsA-F2 ACCCGGCGACGCTGTTTGTTATCTTTATGT Klebsiella pneumoniae rcsA gene \ 2024 Bacterium
RPB0283 rcsA-R2 GATACCGTCTTCGCTTTGATGTTCATTTGC Klebsiella pneumoniae rcsA gene \ 2024 Bacterium
RPB0284 KPC-F3 CGTTCCGTCTGGACCGCTGGGAGCTGGA Klebsiella pneumoniae KPC gene \ 2024 Bacterium
RPB0284 KPC-R3 TGCGGTGGTTGCCGGTCGTGTTTCCCTT Klebsiella pneumoniae KPC gene \ 2024 Bacterium
RPB0285 nuc-LF2 DIG-TGTATTTTCTTTTTAATATTGCCTTTATGCG Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0285 nuc-LR2 Biotin-TTGTCACTGAGTAAAACAGAATCAAATATGC Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0286 rcsA-LF3 6-FAM-GACAAAGGTCAAAGAACTGATAAATATGGA Klebsiella pneumoniae rcsA gene \ 2025 Bacterium
RPB0286 rcsA-LR3 Biotin-TTCACTTTTTCTTAAAAGTTGTTCATGTGT Klebsiella pneumoniae rcsA gene \ 2025 Bacterium
RPB0287 Forward-RPA CCAAGCTGCGCCAGGGCAGCTATTT Mycobacterium tuberculosis IS10181 gene \ 2024 Bacterium
RPB0287 Reverse-RPA TTGGCCATGATCGACACTTGCGA Mycobacterium tuberculosis IS10181 gene \ 2024 Bacterium
RPB0288 16S rRNA-F Biotin-TGAGTAACACGTGGGTGATCTGCCCTGCACTTTGG Mycobacterium tuberculosis H37Rv 16S rRNA M. smegmatis gene X52922.1 2025 Bacterium
RPB0288 16S rRNA-R FAM-AGTCCCAGTGTGGCCGGTCACCCTCTCAGGCCGGC Mycobacterium tuberculosis H37Rv 16S rRNA M. smegmatis gene X52922.1 2025 Bacterium
RPB0289 H9-F GGGGTAGCTGCGCAGTGCAATGTCAGACAGA Influenza A virus (H9N2) HA \ 2024 Virus
RPB0289 H9-R TTCTAGATCTAGTAGAGGACTATTCGGGGCCATAGC Influenza A virus (H9N2) HA \ 2024 Virus
RPB0289 H9-probe ACAACATTGCCCTTCCAAAATGTAAGTAAG(FAM-dT)(THF)(BHQ1-dT) GCATTTGGAAACTGC[C3-spacer] Influenza A virus (H9N2) HA \ 2024 Virus
RPB0290 RPA3-F TAATACGACTCACTATAGGGCAGGAGTCGGAATGCGTTTG Influenza A virus (H9N2) HA gene KM245331.1 2024 Virus
RPB0290 RPA3-R TGGGCTAATATTTATAATTTTCCCCTCTCT Influenza A virus (H9N2) HA gene KM245331.1 2024 Virus
RPB0291 H5-RPA-F1 AGTGGRTAYGCTGCAGACAAAGAATC Influenza A virus (H5) \ \ 2025 Virus
RPB0291 H5-RPA-F2 AGTGGTTAYGCTGCAGACAAAGAATC Influenza A virus (H5) \ \ 2025 Virus
RPB0291 H5-RPA-F3 AGTGGATACGCTGCAGACARGGAGTC Influenza A virus (H5) \ \ 2025 Virus
RPB0291 H5-RPA-R1 AAGTTCAGCATTATAAGTCCAGACATCTA Influenza A virus (H5) \ \ 2025 Virus
RPB0291 H5-RPA-R2 AAGTTCTGCATTGTAAGTCCATACATCTA Influenza A virus (H5) \ \ 2025 Virus
RPB0292 F 5′ FAM-AGTTCAAGAAATTCAACTCCAGGCAGCAGTA SARS-CoV-2 N gene \ 2025 Virus
RPB0292 R 5′ Biotin-GCCTCAGCAGCAGATTTCTTAGTGACAGTTT SARS-CoV-2 N gene \ 2025 Virus
RPB0293 RPA\F CAAGCGTTACTCGGAATTACTGGGCGTAA Stenotrophomonas maltophilia N gene \ 2024 Bacterium
RPB0293 RPA\R CCAAATTGCACCCAACATCCAGTTCGCATCG Stenotrophomonas maltophilia N gene \ 2024 Bacterium
RPB0294 HA-RPA-F TCTAGTATGCCATTCCACAACATACACCCCC Influenza A virus (H5N1) HA gene AF144305.1 2024 Virus
RPB0294 HA-RPA-R AACCATCTACCATTCCCTGCCATCCTCCCTC Influenza A virus (H5N1) HA gene AF144305.1 2024 Virus
RPB0295 M2-RPA-F AGCTATACAAGAAGCTGAAAAGAGAAATAAC Influenza A virus (H5N1) M2 gene AF144305.1 2024 Virus
RPB0295 M2-RPA-R CTGCTCACAAGTGGCACACACTAGGCCAAAA Influenza A virus (H5N1) M2 gene AF144305.1 2024 Virus
RPB0296 AIV-NP-F GAAATTAATACGACTCACTATAGGGACAATGGTGATGGAACTGATTCGGATGATAAA Influenza A virus Nucleprotein (NP) gene MW265408.1 2024 Virus