Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0382 H3R GTGCATCTGATCTCATTATTGAGCTTTTCC Influenza A virus (H3N2) HA \ 2023 Virus
RPB0383 N2F CATTTACAATGGGAGGCTTGTAGATAGTG Influenza A virus (H3N2) NA \ 2023 Virus
RPB0383 N2R CAATTTGCTAGTATGAACGATTTTCCCCT Influenza A virus (H3N2) NA \ 2023 Virus
RPB0384 RPA-F GAAATTAATACGACTCACTATAGGGTCAAGAGGAGATGGAAGGCTTGATGA Nipah virus N gene AY988601.1 2023 Virus
RPB0384 RPA-R ACGTACTTAGCCCATCTTCTAGTTTCA Nipah virus N gene AY988601.1 2023 Virus
RPB0385 F CTCACCGTGCCCAGTGAGCGAGGACTGCAG Influenza A virus (H1) M gene \ 2023 Virus
RPB0385 R CCATCCTATTGTATATGAGGCCCATGCAAC Influenza A virus (H1) M gene \ 2023 Virus
RPB0386 mRPA-4-F CAAGACCAATC CTGTCACCTCTGACTAAGGG G Influenza A virus M gene \ 2023 Virus
RPB0386 mRPA-4-R TCCATGTTGTTTGGGTCTCCATTTCCATTTAGGGC Influenza A virus M gene \ 2023 Virus
RPB0387 NP1-RPA-F GAGAGAGAAGGGTACTCCCTGGTTGGAATAGATCC Influenza A virus NP gene \ 2023 Virus
RPB0387 NP1-RPA-R TTCTCATTTGGTCTAATGAGACTAAAGACCTGGC Influenza A virus NP gene \ 2023 Virus
RPB0388 AIV-F CTCATG GARTGG MTAA AGACAAGAC CAAT Influenza A virus M gene KU042441.1 2023 Virus
RPB0388 AIV-R ACAAAVCGTCTACGC TGCAGTCCTCGC TCA Influenza A virus M gene KU042441.1 2023 Virus
RPB0388 AIV-P CAC CTC TGACTA ARG GGATTT TAG GRT TTG \i6FAMdT\ \THF\ \iBHQ1dT\TCACGC TCACC[C3-spacer Influenza A virus M gene KU042441.1 2023 Virus
RPB0389 F GTCTTTGCTGGGAAGAACACCGATCTTGAGG Influenza A virus M gene \ 2023 Virus
RPB0389 R CTACGCTGCAGTCCTCGCTCACTGGGCACGGTGA Influenza A virus M gene \ 2023 Virus
RPB0389 P CTCTCATGGAATGGCTAAAGACAAGACCAA(FAM-dT)(THF)C(BHQ1-dT)GTCACCTCTGACTAA[C3-spacer] Influenza A virus M gene \ 2023 Virus
RPB0390 F ATGCTCACCACCCGGCTGGTCGTGTTGTAG Mycobacterium CARDS LR214945.1 2023 Bacterium
RPB0390 R GCTTCGCTATCGTTTGCGTGCCCTGATTGA Mycobacterium CARDS LR214945.1 2023 Bacterium
RPB0391 M1-BbsI-F ATGGCAGATTCAACGGTACTATTACCGTT SARS-CoV-2 BbsI \ 2023 Virus
RPB0391 M1-BbsI-R CCTACAAGACAAGCCATTGCGATAGCAATT SARS-CoV-2 BbsI \ 2023 Virus
RPB0392 M2-Xbal-F TTGTAGGCTTGATGTGGCTCAGCTACTTCA SARS-CoV-2 XbaI \ 2023 Virus
RPB0392 M2-Xbal-R TTACTGTACAAGCAAAGCAATATTGTCACTGCTA SARS-CoV-2 XbaI \ 2023 Virus
RPB0393 M-BamHI-pcDNA3.1-F GGATCCATGGCAGATTCCAACGGTACTATTACC SARS-CoV-2 M gene \ 2023 Virus
RPB0393 M-EcoRI-pcDNA3.1-R GAATTCTTACTGTACAAGCAAAGCAATATTGTCACTGCT SARS-CoV-2 M gene \ 2023 Virus
RPB0394 E fwd GAGACGGGCGACAGATATGTACTCATTCGTTTC SARS-CoV-2 E gene \ 2023 Virus
RPB0394 E rev GGTCCAGAACTGATTTAGACCAGAAGATCAG SARS-CoV-2 E gene \ 2023 Virus
RPB0395 N fwd AACACAAGCTTTCGGCAGACGTGGTCCAGAACA SARS-CoV-2 N gene \ 2023 Virus
RPB0395 N rev GCGTCAATATGCTTATTCAGCAAAATGACTTGATC SARS-CoV-2 N gene \ 2023 Virus
RPB0396 ORF1ab-F ACACCGGAAGCCAATATGGATCAAGAATCC SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0396 ORF1ab-R ACCCACAGGGTCATTAGCACAAGTTGTAGG SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0396 P ATCGTGTTGTCTGTACTGCCGTTGCCACA\i6FAMdT\A\idSp\A\iBHQ1dT\CATCCAAATCCTAAAGG SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0397 F GGTCGGAAGCTCCTATGACAATGCACTAGCC Mycobacterium tuberculosis IS6110 CP016972.1 2023 Bacterium
RPB0397 R TTGAGCGTAGTAGGCAGCCTCGAGTTCGAC Mycobacterium tuberculosis IS6110 CP016972.1 2023 Bacterium
RPB0398 F CCAAGCTGCGCCAGGGCAGCTATTTCCCGGAC Mycobacterium tuberculosis IS1081 CP016972.1 2023 Bacterium
RPB0398 R TTGGCCATGATCGACACTTGCGACTTGGA Mycobacterium tuberculosis IS1081 CP016972.1 2023 Bacterium
RPB0399 FP CCTACGGGTCTGTATCACGAGCAAGCGGC SARS-CoV-2 N gene \ 2023 Virus
RPB0399 RP CGTAGCTGTCGAGCGCATCATTTTTGGAG SARS-CoV-2 N gene \ 2023 Virus
RPB0400 FP CCTGGAGCCTACGGGTCTGTATCACGAGCA Bordetella pertussis CS IS1663 gene CP046995.1 2023 Bacterium
RPB0400 RP AGCACGTAGCTGTCGAGCGCATCATTTTT Bordetella pertussis CS IS1663 gene CP046995.1 2023 Bacterium
RPB0401 HBoV1-F CTGGCAGACAACTCATCACAGGAGCAGGAG Human bocavirus 1 NP1 JN632495.1 2024 Viruses
RPB0401 HBoV1-R CATTATCAATTTGTAGCTGTTGAAACTGTT Human bocavirus 1 NP1 JN632495.1 2024 Viruses
RPB0401 HBoV1-probe GACACAATGGGGAGAGAGGCTCGGGCTCAT(ROX)(THF)T(BHQ1)CATCAGGAACACCC-block Human bocavirus 1 NP1 JN632495.1 2024 Viruses
RPB0402 KPC-F CTTCAG CAACAA ATTGGC GGCGG CGT TATC Klebsiella pneumoniae bla KPC AY034847.1 2023 Bacterium
RPB0402 KPC-R CCACTGTGCAGC TCATTCAAG GGC TTTCTT Klebsiella pneumoniae bla KPC AY034847.1 2023 Bacterium
RPB0403 HA-F CCTGGTATTCGCTCTGATTGC Influenza A virus (H7N9) HA \ 2023 Virus
RPB0403 HA-R TAATACGACTCACTATAGGGAGGCACCGCATGTTTCCATTCT Influenza A virus (H7N9) HA \ 2023 Virus
RPB0404 NA-F GAAACAACCAACACAAGCCA Influenza A virus (H7N9) NA \ 2023 Virus
RPB0404 NA-R TAATACGACTCACTATAGGGCATCCGAGCTTTCTCCAATTCTT Influenza A virus (H7N9) NA \ 2023 Virus
RPB0405 RPA-RdRp-F1 GTTGTAGCTTGTCACACCGTTTCTATAGATTAGC SARS-CoV-2 RdRp \ 2023 Virus