Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0405 RPA-RdRp-R1 CCTGGTTTAACATATAGTGAACCGCCACACAT SARS-CoV-2 RdRp \ 2023 Virus
RPB0405 RdRP_SARSr-P2 FAM-CAGGTGGAACCTCATCAGGAGATGC-BHQ1 SARS-CoV-2 RdRp \ 2023 Virus
RPB0406 RPA F2 AGGCAGCAGTAGGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N gene NC_045512.2 2023 Virus
RPB0406 RPA R2 TTGGCCTTTACCAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N gene NC_045512.2 2023 Virus
RPB0407 ORF1ab-F GAAATTAATACGACTCACTATAGGGCGAAGTTGTAGGAGACATTATACTTAAACC SARS-CoV-2 ORF1ab \ 2023 Virus
RPB0407 ORF1ab-R TAGTAAGACTAGAATTGTCTACATAAGCAGC SARS-CoV-2 ORF1ab \ 2023 Virus
RPB0408 7-opE1-F GAAATTAATACGACTCACTATAGGGAGAGTAAACGTAAAAAGAA SARS-CoV-2 E \ 2023 Virus
RPB0408 7-opE1-R TTTGTAAGCACAAGCTGA SARS-CoV-2 E \ 2023 Virus
RPB0409 7-opS1-F GAAATTAATACGACTCACTATAGGGTCCTAGGTTGAAGATAACCCACATAATAAG SARS-CoV-2 S \ 2023 Virus
RPB0409 7-opS1-R AGGTTTCAAACTTTACTTGCTTTACATAGA SARS-CoV-2 S \ 2023 Virus
RPB0410 F1-Primer TATGTGGAAAGGTTATGGCTGTAGTTGTGAT SARS-CoV-2 ORF1ab gene NC_045512.2 2023 Virus
RPB0410 R1-Primer Bio-T*T*A*T*C*ATTGTAGATGTCAAAAGCCCTGTAT SARS-CoV-2 ORF1ab gene NC_045512.2 2023 Virus
RPB0411 F4-Primer CAAAAGATCACATTGGCACCCGCAATCCTG Influenza A virus (H1N1) N gene NC_019843.3 2023 Virus
RPB0411 R4-Primer Bio-T*C*T*T*G*AACTGTTGCGACTACGTGATGAGGAA Influenza A virus (H1N1) N gene NC_019843.3 2023 Virus
RPB0412 RPA forward CGTGGACGTATTCGTATCGTCAATGATATGGCACTC Staphylococcus aureus vicK gene \ 2023 Bacterium
RPB0412 RPA reverse CACGTGCGATTAGACCTTCTTCTTCATTTAAATC Staphylococcus aureus vicK gene \ 2023 Bacterium
RPB0412 RPA exo AGATGCTTGGTATGGCGAAAGAAGACATCATCGGATAT\iBHQ-1dT\A\idSp\A\iFluorT\GTTAAGTGTATTAAG\3Phos\ Staphylococcus aureus vicK gene \ 2023 Bacterium
RPB0413 S501RPAF1 TGTATAGATTGTTTAGGAAGTCTAATCTCAA SARS-CoV-2 S gene \ 2023 Virus
RPB0413 S501RPAR1 AGACTCAGTAAGAACACCTGTGCCTGTTAA SARS-CoV-2 S gene \ 2023 Virus
RPB0413 S478RPAF3 ACCAGATGATTTTACAGGCTGCGTTATAGCTTG SARS-CoV-2 S gene \ 2023 Virus
RPB0413 S478RPAR5 CAATTAAAACCTTTAACACCATTACAA SARS-CoV-2 S gene \ 2023 Virus
RPB0414 NRPAF GTTCCTCATCACGTAGTCGCAACAGTTCAAGAA SARS-CoV-2 N gene \ 2023 Virus
RPB0414 NRPAR GCTTCTTAGAAGCCTCAGCAGCAGATTTCTTAG SARS-CoV-2 N gene \ 2023 Virus
RPB0415 ERPAF1 TACTCATTCGTTTCGGAAGAGACAGGTACGTT SARS-CoV-2 E gene \ 2023 Virus
RPB0415 ERPAR1 CAGATTTTTAACACGAGAGTAAACGTAAAAAGAA SARS-CoV-2 E gene \ 2023 Virus
RPB0415 ERPAF2 GAAGAGACAGGTACGTTAATAGTTAATAGC SARS-CoV-2 E gene \ 2023 Virus
RPB0415 ERPAR2 GAAGGTTTTACAAGACTCACGTTAACAATATT SARS-CoV-2 E gene \ 2023 Virus
RPB0416 MERS-CoV NRPAF AAGGTTCAAGATCAGGAAACTCTACCCGCGGC MERS-CoV N gene \ 2023 Virus
RPB0416 MERS-CoV NRPAR ACTGGCTGTAGGAGCAAGCTCAGCAATTTGGGGC MERS-CoV N gene \ 2023 Virus
RPB0417 HA1NRPAF AATGAACTATTACTGGACACTAGTAGAGCCGG Influenza A virus (H1N1) H1N1 HA1 N gene \ 2023 Virus
RPB0417 HA1RPAR TGGCCCCAAATAGGCCTCTAGATTGAATAGACGGG Influenza A virus (H1N1) H1N1 HA1 N gene \ 2023 Virus
RPB0418 NA1RPAF AAACGGTTTTGAGATGATTTGGGATCCGAACGG Influenza A virus (H1N1) H1N1 HN1 N gene \ 2023 Virus
RPB0418 NA1RPAR TGGTAAATGGCAACTCAGCACCGTCTGGCC Influenza A virus (H1N1) H1N1 HN1 N gene \ 2023 Virus
RPB0419 RF CATGCACATCGCCGGACAGGATGCTTCGGA HAdV AdvB AdvE \ 2023 Virus
RPB0419 RR Biotin-TTTGTAAGAGTATGTATTGTCCTCCCGGTC HAdV AdvB AdvE \ 2023 Virus
RPB0419 P FAM-TAGAAACCCCACAGTAGCGCCCACCCACGAT\THF\TGACCACCGACCGTAGC\C3-Spacer\ HAdV AdvB AdvE \ 2023 Virus
RPB0420 F3 GTTCCAAAGAGAAAACGGACTGCGAGAGGC Influenza A virus (H7) HA \ 2023 Virus
RPB0420 R3 Biotin-CTTTTGTAATCTGCAGCAGTTCCCTCTC Influenza A virus (H7) HA \ 2023 Virus
RPB0420 P FAM-TTCATTGAAAATGGATGGGAAGGCCTAAT TG\THF\TGGTTGGTATGGTTTC[C3 Spacer] Influenza A virus (H7) HA \ 2023 Virus
RPB0421 RT-RAA F3 GAACCTTTATGACAAAGTCCGACTACAGC Influenza A virus (H5) HA gene \ 2023 Virus
RPB0421 RT-RAA R1 TTCTGAGTACTGGGGGTAGTCATACGTTC Influenza A virus (H5) HA gene \ 2023 Virus
RPB0421 H5-LFD Probe FAM-TAGGGATAATGCAAAGGAGCTGGGTAATGGTT[THF]TTTCGAGTTCTATC -3′C3spacer Influenza A virus (H5) HA gene \ 2023 Virus
RPB0422 HADV3 outer-F ATTCCGGCACAGCTTACAATTCACTCGCTCC HAdV3 \ \ 2023 Virus
RPB0422 HADV3 outer-R TCAGTAGTGG TAATGTCTTT CCCAATTTGC HAdV3 \ \ 2023 Virus
RPB0422 HADV3 P FAM-ACAATGCAGTAACTACCACCACAAAC-BHQ HAdV3 \ \ 2023 Virus
RPB0423 HADV7 outer-F ACAACGGGAGAAGACAATGCCACCACATACAC HAdV7 \ \ 2023 Virus
RPB0423 HADV7 outer-R TCCATCAATATCAGTCCATGATTCTTCTCC HAdV7 \ \ 2023 Virus
RPB0423 HADV7 P HEX-AAGACATTACTGCAGACAACAAGCC-BHQ HAdV7 \ \ 2023 Virus
RPB0424 HRSV outer-F TCCYAATTGTATAGCATTCATAGGTGAAGGAGC HRSV A \ \ 2023 Virus
RPB0424 HRSV outer-R TTGCATCTGTAGCAGGAATGGTYAAATTYTCAC HRSV A \ \ 2023 Virus