Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0424 HRSV P Cy5-ACAGAAGTYTGAAAGATTGC-BHQ HRSV A \ \ 2023 Virus
RPB0425 SI-n-RPA-Forward_v4 gaaattaatacgactcactatagggGAACTTCTCCTGCTAGAATGGCTG SARS-CoV-2 N \ 2023 Virus
RPB0425 SI_n-RPA-Reverse_v1 CAGACATTTTGCTCTCAAGCTGGTTCAATC SARS-CoV-2 N \ 2023 Virus
RPB0426 SL_s-RPA-Forward_v1 gaaattaatacgactcactatagggAGGTTTCAAACTTTACTTGCTTTACATAGA SARS-CoV-2 S gene \ 2023 Virus
RPB0426 SL_s-RPA-Reverse_v1 TCCTAGGTTGAAGATAACCCACATAATAAG SARS-CoV-2 S gene \ 2023 Virus
RPB0427 LFD-Sau-F3 AATTACATAAAGAACCTGCGACTTTAATTA Staphylococcus aureus Nuc \ 2023 Bacterium
RPB0427 LFD-Sau-R2 [biotin] ATGCACTTGCTTCAGGACCATATTTCTCTA Staphylococcus aureus Nuc \ 2023 Bacterium
RPB0427 NFO-Sau [FAM]GCGATTGATGGTGATACGGTTAAATTAATG[THF]ACAAAGGTCAACCA[C3spacer] Staphylococcus aureus Nuc \ 2023 Bacterium
RPB0428 LFD-Kpn-F2 TTACCGCCATTCTGGTGGCGATAATTTCAAC Klebsiella pneumoniae CelB \ 2023 Bacterium
RPB0428 LFD-Kpn-R3 [biotin] CAAGTGATGTTAGCGGAACCTGGATTAAT Klebsiella pneumoniae CelB \ 2023 Bacterium
RPB0428 NFO-Kpn [FAM]AATGTCCCTGAATTTATCTCTAAATCGTTC[THF]CTTCATTGATTCCAG[C3spacer] Klebsiella pneumoniae CelB \ 2023 Bacterium
RPB0429 LFD-Pae-F2 CTGAACGCCGGTAACCAGCTCAGCCACATG Pseudomonas aeruginosa Eta \ 2023 Bacterium
RPB0429 LFD-Pae-R3 [biotin]GGCACAACACCTTGCCGCTGGCCCATTCGC Pseudomonas aeruginosa Eta \ 2023 Bacterium
RPB0429 NFO-Pae [FAM]CGAAGCTGGCGCGCGATGCCACCTTCTTCG[THF]CAGGGCGCACGAGAG[C3spacer] Pseudomonas aeruginosa Eta \ 2023 Bacterium
RPB0430 LFD-Hin-F1 CGTCAATGCTCACTCAACGCTTAACTGGTC Haemophilus influenzae Fuck \ 2023 Bacterium
RPB0430 LFD-Hin-R1 [biotin]GAGTATCATGTCCACAAGAAATGACAGGTAC Haemophilus influenzae Fuck \ 2023 Bacterium
RPB0430 NFO-Hin [5’FAM]AGCATCGCTGGGTTTAAGTAATAACCATTTCCCT[THF]CTATGCGTTATGCAGGT[C3spacer] Haemophilus influenzae Fuck \ 2023 Bacterium
RPB0431 F TTATGACAAAGTCCGACTACAGCTTAGG Influenza A virus (H5) HA gene \ 2023 Virus
RPB0431 R CCTTTTTAATCTTGCTTCTTCTGAGTACTG Influenza A virus (H5) HA gene \ 2023 Virus
RPB0432 Biotin-FP Biotin-CTACTGTAACTGGTTGACCATATGCCTTACT Mycoplasma pneumoniae \ \ 2023 Bacterium
RPB0432 RP CAGCAACTGCCATCCGTGGTACATATTCAAAC Mycoplasma pneumoniae \ \ 2023 Bacterium
RPB0433 E1-RT-RAA-6F GTTTCGGAAGAGACAGGTACGTTAATAGTT SARS-CoV-2 E gene \ 2023 Virus
RPB0433 E1-RT-RAA-R2 AGACCAGAAGATCAGGAACTCTAGAAGAAT SARS-CoV-2 E gene \ 2023 Virus
RPB0433 SARS-CoV-E-F CAACGGTTTACGTCTACTCGCGTGTTAAA SARS-CoV-2 E gene \ 2023 Virus
RPB0433 SARS-CoV-E-R TTTAACACGCGAGTAGACGTAAACCGTTG SARS-CoV-2 E gene \ 2023 Virus
RPB0434 MERS-ORF1a-F TACGAGCCCACTACTCCCATTTCGTCAG MERS-CoV ORF1a \ 2023 Virus
RPB0434 MERS-ORF1a-R CTGACGAAATGGGAGTAGTGGGCTCGTA MERS-CoV ORF1a \ 2023 Virus
RPB0435 MERS-upE-F CTCTGCGCTACTATGGGTCCCGTGTAGAG MERS-CoV upE \ 2023 Virus
RPB0435 MERS-upE-R CTCTACACGGGACCCATAGTAGCGCAGAG MERS-CoV upE \ 2023 Virus
RPB0436 MERS-ORF1b-F TCGATGTTGAGGGTGCTCATGCTTCCCGT MERS-CoV ORF1b \ 2023 Virus
RPB0436 MERS-ORF1b-R ACGGGAAGCATGAGCACCCTCAACATCGA MERS-CoV ORF1b \ 2023 Virus
RPB0437 F CCTCTTCTCGTTCCTCATCACGTAGTCGCAAC SARS-CoV-2 N \ 2023 Virus
RPB0437 R AGTGACAGTTTGGCCTTGTTGTTGTTGGCCTT SARS-CoV-2 N \ 2023 Virus
RPB0437 exo-probe TAGAATGGCTGGCAATGGCGGTGATGCTGCbTXfTTGCTTTGCTGCTGCTT-PH SARS-CoV-2 N \ 2023 Virus
RPB0438 F TATGCCATTAGTGCAAAGAATAGAGCTCGCAC SARS-CoV-2 RdRP \ 2023 Virus
RPB0438 R CAACCACCATAGAATTTGCTTGTTCCAATTAC SARS-CoV-2 RdRP \ 2023 Virus
RPB0438 exo-probe TCCTCTAGTGGCGGCTATTGATTTCAATAAbTXfTTTGATGAAACTGTCTATTG-PH SARS-CoV-2 RdRP \ 2023 Virus
RPB0439 WPRE RPA forward primer gaaattaatacgactcactataGGTATTCTTAACTATGTTGCTCCTTTTACG SARS-CoV-2 WPRE \ 2023 Virus
RPB0439 WPRE RPA reverse primer CAGGATTTATACAAGGAGGAGAAAATGAAA SARS-CoV-2 WPRE \ 2023 Virus
RPB0440 S RPA forward primer gaaattaatacgactcactatagggAGGTTTCAAACTTTACTTGCTTTACATAGA SARS-CoV-2 S gene \ 2023 Virus
RPB0440 S RPA reverse primer TCCTAGGTTGAAGATAACCCACATAATAAG SARS-CoV-2 S gene \ 2023 Virus
RPB0441 ORFlab-F3 CTACTGTAGTAATTGGAACAAGCAAATTCTATG SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0441 ORFlab-R1 CACACATGACCATTTCACTCAATACTTGAGC SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0442 N-F1 CAATGCTGCAATCGTGCTACAACTTCCTC SARS-CoV-2 N gene \ 2023 Virus
RPB0442 N-R2 GCCTTGTTGTTGTTGGCCTTTACCAGACAT SARS-CoV-2 N gene \ 2023 Virus
RPB0443 NiV F6 ATTCTTCGCAACCATCAGATTYGGGTTGGAG Nipah virus Nucleocapsid protein (N) gene JN808863.1 2023 Virus
RPB0443 NiV P2 [5'Biotin]ATTCCAGAGTGACCTCAACACCATCAARAGC[Internal dS spacer]TGATGCTACTCTACAG[3'C3 spacer Nipah virus Nucleocapsid protein (N) gene JN808863.1 2023 Virus
RPB0443 RT-RPANFO and RT-RPAExo. [5'FAM]TCAAGAAGCACCATATAAGGGGCTCTTGGG Nipah virus Nucleocapsid protein (N) gene JN808863.1 2023 Virus
RPB0443 RT-RAA. [5'FAM]TTAGTCTGAATTGATTCTTCAAGAAGCACC Nipah virus Nucleocapsid protein (N) gene JN808863.1 2023 Virus
RPB0444 F cctctaatacgactcactataggCTAGAATGGCTGGCAATGGCGGTGATGCT SARS-CoV-2 N gene \ 2023 Virus