Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0341 H5-LFD-F AAGGCAATAGATGGAGTCACCAATAAGGTCAA Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0341 H5-LFD-R Biotin-AACCAGAAGTTCGGCATTATAAGTCCAAAC Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0341 H5-LFD-T FAM-ATTTAATAACTTAGAAAGGAGAATAGAGAAT-THF-TAAACAAGAAGATGGA\C3-spacer\ Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0342 H7-LFD-F Biotin-TCAAATAACAGGGAAATTAAACCGGCTTATAG Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0342 H7-LFD-R CAGATCAATTGTATGCTGGTTCTCCATTGC Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0342 H7-LFD-T FAM-ACAATGAATTCAATGAGGTAGAGAAGCAAAT-THF-GGTAATGTGATAAATTGG\C3-spacer\ Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0343 H9-LFD-F TCAGCGAGGTTGAAACTAGACTTAACATGATC Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0343 H9-LFD-R Biotin-CTTTCCCATCTTCCACCGCATTGGAACCCAATG Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0343 H9-LFD-T FAM-CACTCGATGAGCATGATGCAAATGTAAACAATC-THF-ATATAATAAAGTGAAGA\C3-spacer\ Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0344 H5-RF-F AAGGCAATAGATGGAGTCACCAATAAGGTCAA Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0344 H5-RF-R AACCAGAAGTTCGGCATTATAAGTCCAAAC Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0344 H5-RF-T ATTTAATAACTTAGAAAGGAGAATAGAGAA\i6FAMdT\\idSp\\iBHQ1dT\AAACAAGAAGATGGA\C3-spacer\ Influenza A virus (H5) HA gene CY014311.1 2024 Virus
RPB0345 H7-RF-F TCAAATAACAGGGAAATTAAACCGGCTTATAG Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0345 H7-RF-R CAGATCAATTGTATGCTGGTTCTCCATTGC Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0345 H7-RF-T ACAATGAATTCAATGAGGTAGAGAAGCAAA\i6FAMdT\\idSp\GG\iBHQ1dT\AATGTGATAAATTGG\C3-spacer\ Influenza A virus (H7) HA gene MK453331.1 2024 Virus
RPB0346 H9-RF-F TCAGCGAGGTTGAAACTAGACTTAACATGATC Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0346 H9-RF-R CTTTCCCATCTTCCACCGCATTGGAACCCAATG Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0346 H9-RF-T CACTCGATGAGCATGATGCAAATGTAAACAA\i6FAMdT\C\idSp\A\iBHQ1dT\ATAATAAAGTGAAGA\C3-spacer\ Influenza A virus (H9) HA gene KP865956.1 2024 Virus
RPB0347 HRSVAF AGGACCTACATCTGCTCGGGATGGTA HRSV A \ KT992094.1 2024 Virus
RPB0347 HRSVAR GGTTGGATGATTGGGTTGGTTAGTTTG HRSV A \ KT992094.1 2024 Virus
RPB0347 PorbeA BHQ1-CCTTCGGTATAAGAGATGCCAGCAAATCAA-FAM HRSV A \ KT992094.1 2024 Virus
RPB0348 HRSVBF AGGCTATGGCAAGACTTAGGAATGAGG HRSV B \ MG642066.1 2024 Virus
RPB0348 HRSVBR TGGTGGTTCTGCTGACGGACGTTTA HRSV B \ MG642066.1 2024 Virus
RPB0348 PorbeB BHQ2-CACGACCTGTTGCTGAGTGAGTTGAGACAC-ROX HRSV B \ MG642066.1 2024 Virus
RPB0349 F1 GCTCTCCCTGGATAGAAGAACCCCACTTGT Aspergillus fumigatus Beta-tubulin gene AY048754 2024 Fungus
RPB0349 R1 GGTTACCCTGTCACCAAGAATCAAGTTTAG Aspergillus fumigatus Beta-tubulin gene AY048754 2024 Fungus
RPB0350 RPA-OXA-51-F2 TAAGGCAACCACCACAGAAGTATTTAAG Acinetobacter baumannii OXA-51 \ 2024 Bacterium
RPB0350 RPA-OXA-51-R2 CCTCTTGCTGAGGAGTAATTTTTAAAGG Acinetobacter baumannii OXA-51 \ 2024 Bacterium
RPB0351 RPA-OXA-23-F2 GCCCTGATCGGATTGGAGAACCAGAAAACG Acinetobacter baumannii OXA-23 \ 2024 Bacterium
RPB0351 RPA-OXA-23-R2 AGATCAAGACCGATACGTCGCGCAAGTTCC Acinetobacter baumannii OXA-23 \ 2024 Bacterium
RPB0352 F4 CAAATAGACTGGGACTAAGTTCAGATCAAG Nipah virus N gene KY425646.1 2024 Virus
RPB0352 R4 ATGAAATACTCATCTCCCTTTTGAAGGTAA Nipah virus N gene KY425646.1 2024 Virus
RPB0353 H3-F CTGACTCAGAAATGAACAAACTGTTTGAAAA Influenza A virus (H3N2) HA gene KT022317.1 2024 Virus
RPB0353 H3-R GCAAAGGAAATCCATAGGATCCAATCTTTG Influenza A virus (H3N2) HA gene KT022317.1 2024 Virus
RPB0353 H3-P CTGAGGATATGGGCAATGGTTGTTTCAAAA(FAM-dT)(THF)(BHQ1-dT)ACCACAAATGTGACA [C3-spacer] Influenza A virus (H3N2) HA gene KT022317.1 2024 Virus
RPB0354 F CCAAGCTGCGCCAGGGCAGCTATTTCCCGGAC Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0354 R Biotin-TTGGCCATGATCGACACTTGCGACTTGGA Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0354 P FITC-GAACGCGCACTGACCAGCGTGGTGGCGACCTG(H)TACCTGCTGGGAGTATC-P Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0354 F CAGTAGTGGGCGGTCATCGCGTGATCCTTCGAAACGACC Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0354 R CTCGCCTGTGCGAGTTGGTCAGCCAGAAGCTG Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0354 P CGATAAGATGAGAAGAGGTCATTGCGTCATT(F)(H)C(Q)TCGATTGACTTTTGCT-Spacer C3 Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0355 F GATCCTGCGAGCGTAGGCGTCGGTGACAAAGGCCACGTAG Mycobacterium tuberculosis IS6110 \ 2023 Bacterium
RPB0355 R CTGATCCGGCCACAGCCCGTCCCGCCGATCTCGTCCAGC Mycobacterium tuberculosis IS6110 \ 2023 Bacterium
RPB0355 P CGAACCCTGCCCAGGTCGACACATAGGTGAGGTC(F)(H)C(Q)ACCCACAGCCGGTTA-Spacer C3 Mycobacterium tuberculosis IS6110 \ 2023 Bacterium
RPB0356 F ATATGGTCCTGAAGCAAGTGCATTTACGAA Staphylococcus aureus nuc gene DQ507382.1 2023 Bacterium
RPB0356 R TGAGCATTATTGACCTGAATCAGCGTTGTC Staphylococcus aureus nuc gene DQ507382.1 2023 Bacterium
RPB0357 U-RPA-F GGACATCCATGCAAATGTTACAAGCAGAAAGAG SARS-CoV-2 RNase P gene NC_045512.2 2023 Virus
RPB0357 U-RPA-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGC SARS-CoV-2 RNase P gene NC_045512.2 2023 Virus
RPB0358 RT-A570D-F GGACATCCATGCAAATGTTACAAGCAGAAAGAGCACAGGTGTTCTTACTGAGTCT SARS-CoV-2 (Alpha) S gene NC_045512.2 2023 Virus
RPB0358 RT-A570D-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCCAGGGACTTCTGTGCAGTTA SARS-CoV-2 (Alpha) S gene NC_045512.2 2023 Virus