Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0359 RT-D80A-F GGCATCCATGCAAATGTTACAAGCAGAAAGAGTCAACTCAGGACTTGTTCTTACC SARS-CoV-2 (Beta) S gene NC_045512.2 2023 Virus
RPB0359 RT-D80A-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCGGACTGGGTCTTCGAATCTAAAG SARS-CoV-2 (Beta) S gene NC_045512.2 2023 Virus
RPB0360 RT-T19R-F GGACATCCATGCAAATGTTACAAGCAGAAAGAGTTGTTATTTCTAGTGATGTTCTTGT SARS-CoV-2 (Delta) S gene NC_045512.2 2023 Virus
RPB0360 RT-T19R-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCAGAACAAGTCCTGAGTTGAATG SARS-CoV-2 (Delta) S gene NC_045512.2 2023 Virus
RPB0361 RT-Q954H-F GGACATCCATGCAAATGTTACAAGCAGAAAGAGGATTGCCAACCAATTTAATAGTGC SARS-CoV-2 (Omicron) S gene NC_045512.2 2023 Virus
RPB0361 RT-Q954H-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCCACTTCAGCCTCAACTTTGTC SARS-CoV-2 (Omicron) S gene NC_045512.2 2023 Virus
RPB0362 RT-ORF1ab-F GGACATCCATGCAAATGTTACAAGCAGAAAGAGGCCAACTTAGGTGAACGTGTA SARS-CoV-2 ORF1ab gene NC_045512.2 2023 Virus
RPB0362 RT-ORF1ab-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCGCCCTGGTCAAGGTTAATATAGG SARS-CoV-2 ORF1ab gene NC_045512.2 2023 Virus
RPB0363 RT-N-F GGACATCCATGCAAATGTTACAAGCAGAAAGAGCAGTCAAGCCTCTTCTCGTT SARS-CoV-2 N gene NC_045512.2 2023 Virus
RPB0363 RT-N-R TGCTATGTTCTCTCTCACTTCCCCTTGGATCTGGCGTGACAGTTTGGCCTTGTTG SARS-CoV-2 N gene NC_045512.2 2023 Virus
RPB0364 HRV-B-F ATGTGCTTGRTTGWGANTCCTCCGGCCCCTGAATG HRV VP4 gene \ 2023 Virus
RPB0364 HRV-B-R GTWGANACYTGHGCDCCCATGRTCACAGTATAT HRV VP4 gene \ 2023 Virus
RPB0365 F GGTCCGAAACGCCTCTACGGCTTCGTCGAGCTCTTT Mycobacterium tuberculosis H37Rv IS1081 gene AL123456.3 2023 Bacterium
RPB0365 R TGGCGACCTGCTACCTGCTGGGAGTATCCAC Mycobacterium tuberculosis H37Rv IS1081 gene AL123456.3 2023 Bacterium
RPB0365 P GCCATGATCGACACTTGCGACTTGGAAAGC(FAM-dT)(THF)(BHQ1-dT)GTCACACCAAGTGTT[C3-spacer] Mycobacterium tuberculosis H37Rv IS1081 gene AL123456.3 2023 Bacterium
RPB0366 RPA-Forward CAATATGGAGACCGTTTTCAGGTATTTCAAG Pseudomonas aeruginosa \ \ 2023 Bacterium
RPB0366 RPA-Reverse TGACTTGCATGCAGGATTACCGTCTATTAGAGC Pseudomonas aeruginosa \ \ 2023 Bacterium
RPB0367 SARS-CoV-2 F TGGTGGACCCTCAGATTCAACTGGCAGTAAC SARS-CoV-2 N gene \ 2023 Virus
RPB0367 SARS-CoV-2 R CTTGCCATGTTGAGTGAGAGCGGTGAACCAAG SARS-CoV-2 N gene \ 2023 Virus
RPB0368 FluA F GGCTCTCATGGAATGGCTAAAGACAAGACC Influenza A virus Matrix gene \ 2023 Virus
RPB0368 FluA R GTATAGTTTAACTGCTCTATCCATGTTGTTCG Influenza A virus Matrix gene \ 2023 Virus
RPB0369 FluB F AAACGGAACATTCCTCAAACACCCCAATGG Influenza B virus NS gene \ 2023 Virus
RPB0369 FluB R CTCCCTCTTCTGGTGATAATCGGTGCTCTTG Influenza B virus NS gene \ 2023 Virus
RPB0370 S-RPA-F1 GAAATTAATACGACTCACTATAGGGTTCTAATGTTTTTCAAACACGTGCAGGCTGTTT SARS-CoV-2 S gene \ 2023 Virus
RPB0370 S-RPA-R1 ATAGTGTAGGCAATGATGGATTGACTAGCTA SARS-CoV-2 S gene \ 2023 Virus
RPB0371 ORF1ab-RPA-F1 GAAATTAATACGACTCACTATAGGGGTTTTACACTTAAAAACACAGTCTGTACCGT SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0371 ORF1ab-RPA-R1 ATTGTGCATCAGCTGACTGAAGCATGGGTT SARS-CoV-2 ORF1ab gene \ 2023 Virus
RPB0372 N-RPA-F1 GAAATTAATACGACTCACTATAGGGAAATTCAACTCCAGGCAGCAGTAGGGGAACTT SARS-CoV-2 N gene \ 2023 Virus
RPB0372 N-RPA-R1 CTTGTTGTTGTTGGCCTTTACCAGACATTTTG SARS-CoV-2 N gene \ 2023 Virus
RPB0373 RPA-S371-375-F GAAATTAATACGACTCACTATAGGGCAACTGTGTTGCTGATTATTCTGTCCTATA SARS-CoV-2 (Omicron) Spike gene \ 2023 Virus
RPB0373 RPA-S371-375-R AGTTTGCCCTGGAGCGATTTGTCTGACTTCA SARS-CoV-2 (Omicron) Spike gene \ 2023 Virus
RPB0374 F TGCAATTAGAGGGAAGATGAGAAATACGAG Klebsiella pneumoniae peg344 gene \ 2023 Bacterium
RPB0374 R CTTTCGCTGGTGGGGAGTATCTTTGAGAGG Klebsiella pneumoniae peg344 gene \ 2023 Bacterium
RPB0374 P AGCCCTTTTCTGCAGAGAAAAATAGCACAG[FAM-dt][THF][BHQ1-dt] CCCAAAAACTCCAGC[3′-block] Klebsiella pneumoniae peg344 gene \ 2023 Bacterium
RPB0375 F CAATTCGGCTAACATTTTTCTTTAAGAATGC Klebsiella pneumoniae rmpA gene \ 2023 Bacterium
RPB0375 R TATTCAGGGAAATGGGGAGGGTACAAAATG Klebsiella pneumoniae rmpA gene \ 2023 Bacterium
RPB0375 P GCATGTTAACATAGATGTCATAATCACACCC[FAM-dt][THF] [BHQ1-dt]AGGATAAAACCGCCC[3′-block] Klebsiella pneumoniae rmpA gene \ 2023 Bacterium
RPB0376 F ATCAGTGAGGTCGCCCGTCTACTTGGTGTT Mycobacterium tuberculosis IS6110 \ 2023 Bacterium
RPB0376 R CTTCAGCTCAGCGGATTCTTCGGTGGTT Mycobacterium tuberculosis IS6110 \ 2023 Bacterium
RPB0377 F CGCCAGGGCAGCTATTTCCCGGACTGGCTG Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0377 R CTTGGAAAGCTTTGTCACACCAAGTGTTTCGAC Mycobacterium tuberculosis IS1081 \ 2023 Bacterium
RPB0378 E71F CTGAAATTGGAGCATCATCAAATGCTAGTGAC EV-A71 VP1 gene \ 2023 Virus
RPB0378 E71R CACAAACATATATTGGAGCAATTGTGGGAC EV-A71 VP1 gene \ 2023 Virus
RPB0379 CVA16F GATCCGGGTCACATGAGAACTCAAACTC CVA16 VP4 gene \ 2023 Virus
RPB0379 CVA16F CATCTCATGTATAACGTCCATGACAGGGTCAG CVA16 VP4 gene \ 2023 Virus
RPB0380 H1F CAGACACTGTAGACACAGTACTAGAAAAGA Influenza A virus (H1N1) HA \ 2023 Virus
RPB0380 H1R CCTCATAATTGATGAAATCTCCTGGGTAAC Influenza A virus (H1N1) HA \ 2023 Virus
RPB0381 N1F GGCATAATAACAGACACTATCAAGAGTTGG Influenza A virus (H1N1) NA \ 2023 Virus
RPB0381 N1R CATTCCTCATAGTGATAATTAGGGGCTTTC Influenza A virus (H1N1) NA \ 2023 Virus
RPB0382 H3F CACAGTATCTACCAAAAGAAGCCAACAAG Influenza A virus (H3N2) HA \ 2023 Virus