Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0040 N-R TCTTTCATTTTACCGTCACCACCACGA MERS-CoV N gene \ 2023 Virus
RPB0040 N-P AGGACAAGGCGTTCCAATTAACACCAATAG-THF-AGTCCAGATGACCAA MERS-CoV N gene \ 2023 Virus
RPB0041 RV2019-nCoV_N3 Biot GTGTAGCACGATTGCAGCATTG MERS-CoV N gene \ 2021 Virus
RPB0041 FW2019-nCoV_N1 GACCCCAAAATCAGCGAAAT MERS-CoV N gene \ 2021 Virus
RPB0041 Probe2019-nCoV_N1ext ACCCCGCATTACGTTTGGTGGACCCTCAGAT/idSp/CAACTGGCAGTAACCAGA MERS-CoV N gene \ 2021 Virus
RPB0042 F-E-gene TTACACTAGCCATCCTTACTGCGCTTCGAT MERS-CoV E gene \ 2021 Virus
RPB0042 R-E-gene GCTAAAATTAAAGTTCCAAACAGAAAAACT MERS-CoV E gene \ 2021 Virus
RPB0042 exo-probe-E-gene AGACCAGAAGATCAGGAACTCTAGAAGAAT[THF]GATTTTTAACACGAG MERS-CoV E gene \ 2021 Virus
RPB0043 F-RdRP-gene GAGTGTGCTCAAGTATTGAGTGAAATGGTC MERS-CoV RdRP gene \ 2021 Virus
RPB0043 R-RdRP-gene CTGTGTTGTAAATTGCGGACATACTTATCG MERS-CoV RdRP gene \ 2021 Virus
RPB0043 exo-probe-RdRP-gene TTACCATCAGTAGATAAAAGTGCATTAACA[THF]GCCGTGACAGCTTGA MERS-CoV RdRP gene \ 2021 Virus
RPB0044 MERS-CoV N FP GTTCACAAGGTTCAAGATCAGGAAACTCTA MERS-CoV MERS-CoV E gene \ 2021 Virus
RPB0044 MERS-CoV N RP TTCTTAGTGATTACTTTTGGCTGCGATTGC MERS-CoV MERS-CoV E gene \ 2021 Virus
RPB0045 SARS-CoV2 S FP ACAGGCCTGCGTTATAGCTTGGAATTCTAAC SARS-CoV-2 SARS-CoV S gene \ 2021 Virus
RPB0045 SARS-CoV2 S RP CCTTCAACACCATTACAAGGTGTGCTACCG SARS-CoV-2 SARS-CoV S gene \ 2021 Virus
RPB0046 SARS-CoV S FP TGAGTGCGACATTCCTATTGGAGCTGGCAT SARS-CoV SARS-CoV S gene \ 2021 Severe acute respiratory syndrome-related coronavirus
RPB0046 SARS-CoV S RP GTAGGTATAGCAATGGTGTTATTAGAGTAA SARS-CoV SARS-CoV S gene \ 2021 Severe acute respiratory syndrome-related coronavirus
RPB0047 UpE-F TTAGCCTAGTTTCTGTTAACTGACTTCTCCT MERS-CoV MERS-CoV UpE gene \ 2021 Virus
RPB0047 UpE-R GTTCGTTTTCCATATGTCCAAAGAGAGAC MERS-CoV MERS-CoV UpE gene \ 2021 Virus
RPB0047 UpE-P GCGATTCAGTTCCTCTTCACATAATCCCCCGAGC[THF]CGCTTATCG MERS-CoV MERS-CoV UpE gene \ 2021 Virus
RPB0048 N-F CCCTTGAGTGGCAAAGTAAAGCAATCCGC MERS-CoV MERS-CoV N gene \ 2021 Virus
RPB0048 N-R AGGAGCAAGCTCAGCAATTTGGCCAACGTG MERS-CoV MERS-CoV N gene \ 2021 Virus
RPB0048 N-P AGCAATTTGGGGCCAACGTGGGTCCTCAGT[THF]CCGAGTTTATTCAAT MERS-CoV MERS-CoV N gene \ 2021 Virus
RPB0049 F TCCYARTTGTATAGCATTCATAGGTGAAGGAG RSV A/B UTR gene \ 2020 Virus
RPB0049 R TTGCATCTGTAGCAGGAATGGTYAAATTYTCA RSV A/B UTR gene \ 2020 Virus
RPB0050 f1 ATACACTATTCAACGTAGTACAGGAGA RSV A/B N gene \ 2019 Virus
RPB0050 r1 TGAATTTATGATTTGCATCTTCAGTGATT RSV A/B N gene \ 2019 Virus
RPB0050 probe TAATAGCATACCACATAGTTTGTTTAGGTG(FAM-dT)(THF)(BHQ1-dT)TTGCACATCATAATT RSV A/B N gene \ 2019 Virus
RPB0051 RT-RPA-F CTAAAGTTGCGTAGTGATGTGCTATTACCT SARS-CoV-2 (Omicron) ORF1ab gene C9866T \ 2023 Virus
RPB0051 RT-RPA-R TCAGAACCTGAGTTACTGAAGTCATTGAGA SARS-CoV-2 (Omicron) ORF1ab gene C9866T \ 2023 Virus
RPB0052 RT-RPA-F2 TACCTGTATAGATTGTTTAGGAAGTCTAAT SARS-CoV-2 (Omicron) S gene A23040G \ 2023 Virus
RPB0052 RT-RPA-R2 AAAAGAAAGTACTACTACTGTGTATGGTTG SARS-CoV-2 (Omicron) S gene A23040G \ 2023 Virus
RPB0053 RT-RPA-F3 TTGCGGCAATAGTTTATAACACTTTGCTTC SARS-CoV-2 (Omicron) ORF7b gene G27788T \ 2023 Virus
RPB0053 RT-RPA-R3 ATTTCATGTTCGTTTAGGCGTGACAAGTTTCA SARS-CoV-2 (Omicron) ORF7b gene G27788T \ 2023 Virus
RPB0054 RT-RPA-F4 TAGAGTTCCTGATCTTCTGGTCTAAACGAA SARS-CoV-2 (Omicron) M gene G26529A \ 2023 Virus
RPB0054 RT-RPA-R4 GAAGACAAATCCATGTAAGGAATAGGAAAC SARS-CoV-2 (Omicron) M gene G26529A \ 2023 Virus
RPB0055 RT-RPA-F5 TTATGCTTATTATCTTTTTTTTCTCACTTG SARS-CoV-2 (Omicron) S gene C27889T \ 2023 Virus
RPB0055 RT-RPA-R5 AGGTGCTGATTTTCTAGCTCCTACTACTAAT SARS-CoV-2 (Omicron) S gene C27889T \ 2023 Virus
RPB0056 F GCCATGCGAAATGCTGGTATTGTTGGTGTACTG SARS-CoV-2 \ \ 2023 Virus
RPB0056 R GGGCTTTAACTGCAGAGTCACATGTTGACACTG SARS-CoV-2 \ \ 2023 Virus
RPB0057 COVID-19 RPA F3 GCAACAGTTCAAGAAATTCAACTCCAGGCAGC SARS-CoV-2 N gene \ 2019 Virus
RPB0057 COVID-19 RPA R2 TAGTGACAGTTTGGCCTTGTTGTTGTTGGCCT SARS-CoV-2 N gene \ 2019 Virus
RPB0058 RPA-Fow Primer (N-SARS-CoV-2) TTCCTCATCACGTAGTCGCAACAGTTCAAGAAATT SARS-CoV-2 N gene \ 2021 Virus
RPB0058 RPA-Rev Primer (N-SARS-CoV-2) GTTCAATCTGTCAAGCAGCAGCAAAGCAAGAGCAG SARS-CoV-2 N gene \ 2021 Virus
RPB0059 E gene-RT-RPA primer-F Biotin-CGGAAGAGACAGGTACGTTAATAGTTAATAGC SARS-CoV-2 E gene \ 2020 Virus
RPB0059 E gene-RT-RPA primer-R AGACCAGAAGATCAGGAACTCTAGAAGAAT SARS-CoV-2 E gene \ 2020 Virus
RPB0060 Orf1ab gene-RT-RPA primer-F Digoxin-TGATGCCATGCGAAATGCTGGTATTGTTGG SARS-CoV-2 Orf1ab gene \ 2020 Virus
RPB0060 Orf1ab gene-RT-RPA primer-R CTGCAGTTAAAGCCCTGGTCAAGGTTAATA SARS-CoV-2 Orf1ab gene \ 2020 Virus
RPB0061 RdRp-F CTAATGAGTGTGCTCAAGTATTGAGTGAAAT SARS-CoV-2 RdRp \ 2021 Virus
RPB0061 RdRp-R CAAATGTTAAAAACACTATTAGCATAAGCAGT SARS-CoV-2 RdRp \ 2021 Virus