Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0062 N-F CAGCAGTAGGGGAACTTCTCCTGCTAGAATGG SARS-CoV-2 RdRp and Ngene \ 2021 Virus
RPB0062 N-R TGGCCTTTACCAGACATTTTGCTCAAGCTG SARS-CoV-2 RdRp and Ngene \ 2021 Virus
RPB0063 RdRp-F TATGCCATTAGTGCAAAGAATAGAGCTCGCAC SARS-CoV-2 RdRp gene \ 2021 Virus
RPB0063 RdRp-R TATGCCATTAGTGCAAAGAATAGAGCTCGCAC SARS-CoV-2 RdRp gene \ 2021 Virus
RPB0063 RdRp-P TCCTCTAGTGGCGGCTATTGATTTCAATAAbTXfTTTGATGAAACTGTCTATTG SARS-CoV-2 RdRp gene \ 2021 Virus
RPB0064 E-F GAAGAGACAGGTACGTTAATAGTTAATAGCGTA SARS-CoV-2 E gene \ 2021 Virus
RPB0064 E-R AAAAAGAAGGTTTTACAAGACTCACGTTAACsA SARS-CoV-2 E gene \ 2021 Virus
RPB0064 E-P ATCGAAGCGCAGTAAGGATGGCTAGbTXfTAACTAGCAAGAATAC SARS-CoV-2 E gene \ 2021 Virus
RPB0065 N-F CCTCTTCTCGTTCCTCATCACGTAGTCGCAAC SARS-CoV-2 N gene \ 2021 Virus
RPB0065 N-R AGTGACAGTTTGGCCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT SARS-CoV-2 N gene \ 2021 Virus
RPB0065 N-P TAGAATGGCTGGCAATGGCGGTGATGCTGCbTXfTTGCTTTGCTGCTGCTGCTT SARS-CoV-2 N gene \ 2021 Virus
RPB0066 SARS-COV-2-ORF1ab-F TACACCGGAAGCCAATATGGATCAAGAATCC SARS-CoV-2 ORF1ab gene \ 2021 Virus
RPB0066 SARS-COV-2-ORF1ab-R CCTAAAGGATTTTGTGACTTAAAAGGTAAG SARS-CoV-2 ORF1ab gene \ 2021 Virus
RPB0067 SARS-COV-2-N-F GGGGAACTTCTCCTGCTAGAATGGCTGGCAATGGCGGTG SARS-CoV-2 N gene \ 2021 Virus
RPB0067 SARS-COV-2-N-R CAGCTTGAGAGCAAAATGTCT SARS-CoV-2 N gene \ 2021 Virus
RPB0068 N-Primer 2/3F TTAGGTACTGCTCTTTCCCTCGTC SARS-CoV-2 N gene NC_045512.2 2021 Virus
RPB0068 N-Primer 3R TGTGTACGAATCCCACTAATTCGCC SARS-CoV-2 N gene NC_045512.2 2021 Virus
RPB0068 N-Probe 2A-2/3 GCAGCAGCAAGACGAGGGAAAGAGCAGTACCTAA SARS-CoV-2 N gene NC_045512.2 2021 Virus
RPB0068 N-Probe 2B-3 TGTGTACGAATCCCACTAATTCGCCAATCTGTCAA SARS-CoV-2 N gene NC_045512.2 2021 Virus
RPB0069 O-Primer 1/2R TAACTCATATTGTAGAAGAGTAGAAG SARS-CoV-2 ORF1ab gene NC_045512.2 2021 Virus
RPB0069 O-Primer 2F AGCCAACTCCTATGATCTCCCTATTG SARS-CoV-2 ORF1ab gene NC_045512.2 2021 Virus
RPB0069 O-Probe 1A-2 AACCCACAGGGCAATAGGGAGATCATAGGAGTTGGCT SARS-CoV-2 ORF1ab gene NC_045512.2 2021 Virus
RPB0069 O-Probe 1B TAACTCATATTGTAGAAGAGTAGAAGTTAAGTGTAA SARS-CoV-2 ORF1ab gene NC_045512.2 2021 Virus
RPB0070 CV125-F CTGATTACAAACATTGGCCGCAAATT SARS-CoV-2 N gene \ 2022 Virus
RPB0070 CV434-R CGACTTATTCGTATAACTGCG SARS-CoV-2 N gene \ 2022 Virus
RPB0071 RPA-LF Forward TTGTTCGTTCTATGAAGACTTTTTAGAG SARS-CoV-2 N gene MN988713.1 2021 Virus
RPB0071 RPA-LF Reverse TTTGATCGCGCCCCACTGCGTTCTCCATTC SARS-CoV-2 N gene MN988713.1 2021 Virus
RPB0071 RPA-LF Probe TTGTTCGTTCTATGAAGACTTTTTAGAGTA[dSpacer]CATGACGTTCGTGTT SARS-CoV-2 N gene MN988713.1 2021 Virus
RPB0072 ORF1ab-F5 TTGCCTGGCACGATATTACGCACAACTAATGGT SARS-CoV-2 ORF1ab \ 2020 Virus
RPB0072 ORF1ab-R1 CAAGCTGATGTTGCAAAGTCAGTGTACTCTAT SARS-CoV-2 ORF1ab \ 2020 Virus
RPB0073 N-F4 CTTCCTCAAGGAACAACATTGCCAAAAGGCT SARS-CoV-2 N gene \ 2020 Virus
RPB0073 N-R2 TCTAGCAGGAGAAGTTCCCCTACTGCTGCCTGG SARS-CoV-2 N gene \ 2020 Virus
RPB0074 S gene F1 GTTTTTCTTGTTTTATTGCCACTAGTCTCTA SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene F2 TCTTGTTTTATTGCCACTAGTCTCTAGTCAGT SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene F3 CTCTAGTCAGTGTGTTAATCTTACAACCAGAACT SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene F4 TCAGTGTGTTAATCTTACAACCAGAACTCAAT SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene F5 GTGTTAATCTTACAACCAGAACTCAATTACCCC SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R1 GAATGTAAAACTGAGGATCTGAAAACTTTG SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R2 AGAACAAGTCCTGAGTTGAATGTAAAACTGAGG SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R3 AAGAAAGGTAAGAACAAGTCCTGAGTTGAATGT SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R4 CCATTGGTCCCAGAGACATGTATAGCATGG SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R5 CTCTTAGTACCATTGGTCCCAGAGACATGT SARS-CoV-2 S gene \ 2020 Virus
RPB0074 S gene R6 ATCAAACCTCTTAGTACCATTGGTCCCAGA SARS-CoV-2 S gene \ 2020 Virus
RPB0075 N gene F1 CAACTTCCTCAAGGAACAACATTGCCAAAA SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F2 GGCTTCTACGCAGAAGGGAGCAGAGGCGGCAG SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F3 CAACTGGCAGTAACCAGAATGGAGAACGCA SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F4 TCGAGGACAAGGCGTTCCAATTAACACCAA SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F5 CCTAGGAACTGGGCCAGAAGCTGGACTTCC SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F6 AACTTCTCCTGCTAGAATGGCTGGCAATGG SARS-CoV-2 N gene \ 2020 Virus
RPB0075 N gene F7 ATGAAACTCAAGCCTTACCGCAGAGACAGA SARS-CoV-2 N gene \ 2020 Virus