Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0090 HAdV7-F2 GCCATATTCCGGCACAGCTTACAATTCACT HAdV \ AC_000018.1 2021 Virus
RPB0090 HAdV7-R1 Biotin-TTCTTCTCCAACTTGAGGCTCTGGCTGATA HAdV \ AC_000018.1 2021 Virus
RPB0090 HAdV7-Probe FAM-TCTCAGTGGATAGTTACAACGGGAGAAGAC-[THF]-ATGCCACCACATACA-PO4 HAdV \ AC_000018.1 2021 Virus
RPB0091 HAdV21-F1 TTTGTGCCCGTTGACCGGGAAGACAATACC HAdV \ AB053166.1 2021 Virus
RPB0091 HAdV21-R3 Biotin-GCTCTACCACCATACTTCTCAGTTGTTCCA HAdV \ AB053166.1 2021 Virus
RPB0091 HAdV21-Probe FAM-AGTGGATTGCTGAAGGCGTAAAAAAAGAAG-[THF]-TGGGGGATCTGACGA-PO4 HAdV \ AB053166.1 2021 Virus
RPB0092 HAdV55-F2 TCAAACCCTATTCTGGTACGGCTTACAACT HAdV \ KF911353.1 2021 Virus
RPB0092 HAdV55-R1 Biotin-CGACTTTCTGATTTGGCTGCTCCGTTGTTT HAdV \ KF911353.1 2021 Virus
RPB0092 HAdV55-Probe FAM-CGCGTAACAGAAGAGGAAAACAATACTACT-[THF]-CTTACACTTTTGGCA-PO4 HAdV \ KF911353.1 2021 Virus
RPB0093 Forward primer TCAGAATGGTGTTGATGCCAAAGGTTTT HCoV-NL63 N-gene NC_005831.2 2022 Virus
RPB0093 Reverse primer ACAAGCATTTTGTAGGTGTAGGTAATCT HCoV-NL63 N-gene NC_005831.2 2022 Virus
RPB0093 Probe CAGGCTGCGTTATTCTTTGATAGTGAGGT[-dT-FAM-][-dSpacer-]G[-BMN-Q535-]CACTGATGAAGTGGGTGA[-C3-spacer] HCoV-NL63 N-gene NC_005831.2 2022 Virus
RPB0094 HmPV-N-F4 GGCATGTATCTGTGCAAGCTGA HMPV N gene \ 2021 Virus
RPB0094 HmPV-N-R4 TCCCTCTGTACATTCCTATT HMPV N gene \ 2021 Virus
RPB0095 HRV-A/C-F TAGACCTGGCAGATGAGGCT HRV VP4 MH648096.1 2022 Virus
RPB0095 HRV-A/C-R2 ACGGACACCCAAAGTAGTTGGTTCCATCCC HRV VP4 MH648096.1 2022 Virus
RPB0096 Omp6-F3 CAGGAAATGGTGCTGCTCAAACTTTTGGCGGTTAC Haemophilus influenzae omp6 \ 2022 Bacterium
RPB0096 Omp6-R1B Biotin-ACCAGCTGAGTAACCTTTAACTAGATCTGCA Haemophilus influenzae omp6 \ 2022 Bacterium
RPB0096 Omp6-P FITC-ACACTGATGAACGTGATACACCATAATACAA[THF]ATCGTATTAGGCCAA-C3 spacer Haemophilus influenzae omp6 \ 2022 Bacterium
RPB0097 bexA-F3 CAGGAAATGGTGCTGCTCAAACTTTTGGCGGTTAC Haemophilus influenzae bexA \ 2022 Bacterium
RPB0097 bexA-R1B Biotin-TGTGAAACGAAAATGATAGAACGGTCTTTGC Haemophilus influenzae bexA \ 2022 Bacterium
RPB0097 bexA-P FITC-CGGTTGAGTATGATTGTTATGTAATTGATGAG[THF]TGATTGTAGTAGGG-C3 spacer Haemophilus influenzae bexA \ 2022 Bacterium
RPB0098 MF146 GGCTCTCATGGAATGGCTAAAGACAAGAC Influenza A virus matrix gene \ 2018 Virus
RPB0098 MR425 Biotin-TTGTATATGAGGCCCATGCAACTGGCAAGTG Influenza A virus matrix gene \ 2018 Virus
RPB0098 A-p FITC-TTCACGCTCACCGTGCCCAGTGAGCGAGGAC-THF-GCAGCGTAGACGCTTTG-spacer(C3) Influenza A virus matrix gene \ 2018 Virus
RPB0099 H1F1325 Biotin-TGTTGGTTCTATTGGAAAATGAAAGAACTTT Influenza A virus H1 \ 2018 Virus
RPB0099 H1R1540 TGTTTAATTTTGCTTCCTCTGAGTATTTTGG Influenza A virus H1 \ 2018 Virus
RPB0099 H1-P FITC-TCATAAGTCCCATTTTTGACACTTTCCATGC-THF-CGTGTTATCGCATTTG-spacer(C3) Influenza A virus H1 \ 2018 Virus
RPB0100 H3F763 Biotin-GAATAAGCATCTATTGGACAATAGTAAAAC Influenza A virus H3 \ 2018 Virus
RPB0100 H3R1156 CCCTCAGAATTTTGATGCCTGAAACCGTACCA Influenza A virus H3 \ 2018 Virus
RPB0100 H3-P FITC-ATGGGTGCATCTGATCTCATTATTGAGCTTT-THF-CCCACTTCGTATTTTG-spacer(C3) Influenza A virus H3 \ 2018 Virus
RPB0101 nfo-H7-F TTCTATGCAGAAATGAAATGGCTCCTGTCAA Influenza A virus (H7N9) HA gene \ 2018 Virus
RPB0101 nfo-H7-R [Biotin]AGCTGGGCTTTTTCTTGTATTTTTATATGACTTAG Influenza A virus (H7N9) HA gene \ 2018 Virus
RPB0101 nfo-H7-P [FAM]AAATGAAATGGCTCCTGTCAAACACAGATA[THF]TGCTGCATTCCCGCA[C3-spacer] Influenza A virus (H7N9) HA gene \ 2018 Virus
RPB0102 nfo-N9-F ATAGACCCAGTAGCAATGACACACACTAGTCA Influenza A virus (H7N9) NA gene \ 2018 Virus
RPB0102 nfo-N9-R [Biotin]TTATTATTACCTGGATAAGGGTCATTACACT Influenza A virus (H7N9) NA gene \ 2018 Virus
RPB0102 nfo-N9-P [FAM]CACTAGTCAATATATATGCAGTCCTGTTCTA[THF]AGACAGTCCCCGACCGA[C3-spacer] Influenza A virus (H7N9) NA gene \ 2018 Virus
RPB0103 rmpA2-4F TATAAGAGTATTGGTTGATAGCCGGATTTT Klebsiella pneumoniae rmpA2 MT496757 2022 Bacterium
RPB0103 rmpA2-R Biotin-TTTACATCTGTGACACGATAGTGTTTTCTC Klebsiella pneumoniae rmpA2 MT496757 2022 Bacterium
RPB0103 rmpA2-Mp FITC-TGATTATGACATCTAAGTCTACATGCAAGG[THF]AATTTAATAATAACA-/C3-spacer/ Klebsiella pneumoniae rmpA2 MT496757 2022 Bacterium
RPB0104 khe Forward ACACTTTTCTCAATAACACCGAGCAGGAGGTTC Klebsiella pneumoniae khe AF293352 2020 Bacterium
RPB0104 khe Reverse CGCATAGTGCGCCGCGCTTCGCCCCTTCCCCGG Klebsiella pneumoniae khe AF293352 2020 Bacterium
RPB0104 khe exo probe CGCTCAATCCAGGCTATGCCGCGACGCGCCAGGA(dT-BHQ1)C(dspacer)(dT-FAM)TGGGTTGACCATCC-PH Klebsiella pneumoniae khe AF293352 2020 Bacterium
RPB0105 blaNDM-1 Forward GACCAGACCGCCCAGATCCTCAACTGGATCAAGCA Klebsiella pneumoniae blaNDM-1 NC_023908.1 2020 Bacterium
RPB0105 blaNDM-1 Reverse CTGGTTCGACAACGCATTGGCATAAGTCGCAA Klebsiella pneumoniae blaNDM-1 NC_023908.1 2020 Bacterium
RPB0105 blaNDM-1 exo Probe CCCCGCCGCATGCAGCGCGTCCATACCGCCCA(dT-BHQ2)(dspacer)(dT-LC610)TGTCCTGATGCGCG-PH Klebsiella pneumoniae blaNDM-1 NC_023908.1 2020 Bacterium
RPB0106 Lep-RPA-F1 GTCTTATAGCATTGGTGCCGATTTGGGG Legionella pneumophila mip gene AE017354 2022 Bacterium
RPB0106 Lep-RPA-R1 CCTTTTACTTTATTTTCATCCGCTTTCTTA Legionella pneumophila mip gene AE017354 2022 Bacterium
RPB0106 Lep-RPA-P1 5'-Biotin-TAGCATTGGTGCCGATTTGGGGAAGAATTTT[THF]AAAAATCAAGGCAT-C3-Spacer Legionella pneumophila mip gene AE017354 2022 Bacterium
RPB0107 nLep-RPA-F2 GCGATTTGGAACCACCTGATACCATCTCGA Legionella pneumophila 5S rRNA gene NR_075178.1 2022 Bacterium