Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0321 speB-R TTGATGCCTACAACAGCACTTTGATAACCG Streptococcus pyogenes M1 GAS speB NZ_LS483338.1 2024 Bacterium
RPB0321 P FITC-CTTCTTCCGACTTGACGCACTAATCCCTTC[THF]GCTCTTGATAATGGT-C3spacer Streptococcus pyogenes M1 GAS speB NZ_LS483338.1 2024 Bacterium
RPB0322 RPA-F4 TAATACGACTCACTATAGGGCGCAGATCTCGAGGCTCTC Influenza A virus (H9N2) M gene MK447276.1 2025 Virus
RPB0322 RPA-R4 GCCTTGTCCATGTTGTTTGGGTCTCCATTCCC Influenza A virus (H9N2) M gene MK447276.1 2025 Virus
RPB0323 N-primer F GCTTCTGACACAACTGTGTTCAC SARS-CoV-2 N gene NC_045512.2 2025 Virus
RPB0323 N-primer R CGGCAGACTTCTCCACAGGAGT SARS-CoV-2 N gene NC_045512.2 2025 Virus
RPB0323 N-probe Cy5-ACCTCAAACAGACACCATGG-BHQ1 SARS-CoV-2 N gene NC_045512.2 2025 Virus
RPB0324 ORFlab-primer F ACGGGTTTGCGGTGTAAGTGCAG SARS-CoV-2 ORF1ab gene NC_045512.2 2025 Virus
RPB0324 ORFlab-primer R AGATGTCAAAAGCCCTGTATACG SARS-CoV-2 ORF1ab gene NC_045512.2 2025 Virus
RPB0324 ORFlab-probe FAM-ACACCGTGCGGCACAGGCACTAG-BHQ1 SARS-CoV-2 ORF1ab gene NC_045512.2 2025 Virus
RPB0325 F CCTCAATTAGAGATGGAACTTACACCAGTTG SARS-CoV-2 ORF1ab gene \ 2025 Virus
RPB0325 R ACCTTTTTAGCTTCTTCCACAATGTCTGCAT SARS-CoV-2 ORF1ab gene \ 2025 Virus
RPB0326 F AGGCAGCAGTAGGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N gene \ 2025 Virus
RPB0326 R TTGGCCTTTACCAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N gene \ 2025 Virus
RPB0327 KPC-F AACGCCGCCGCCAATTTGTTGCTGAAGGA Klebsiella pneumoniae KPC MT463290.1 2024 Bacterium
RPB0327 KPC-R TTCCCTTTAGCCAATCAACAAACTGCTGCC Klebsiella pneumoniae KPC MT463290.1 2024 Bacterium
RPB0328 NDM-F AATATTATGCACCCGGTCGCGAAGCTGAG Klebsiella pneumoniae NDM AP023238.1 2024 Bacterium
RPB0328 NDM-R GCCCCGAAACCCGGCATGTCGAGATAGGA Klebsiella pneumoniae NDM AP023238.1 2024 Bacterium
RPB0329 K. pneumoniae-F TTATCCCGACAGCCCGGAGCGTTTTTCGATTGG Klebsiella pneumoniae K.pneumoniae AF293352 2024 Bacterium
RPB0329 K. pneumoniae-R CAGCTTCCAGAGATAGCCGTTTATCCACACTTCCG Klebsiella pneumoniae K.pneumoniae AF293352 2024 Bacterium
RPB0330 RPA-NUC-FW TGGTCC TGA AGCAAGTGC TTT TAC GAA AAA Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0330 RPA-NUC-RV TCTCTT TTT TCG CTTGTG CTTCAC TTT TTC TTA Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0331 ORf1ab-F3 TGCTTCAGTCAGCTGATG SARS-CoV-2 ORF1ab gene \ 2025 Virus
RPB0331 ORf1ab-B3 TTAAATTGTCATCTTCGTCCTT SARS-CoV-2 ORF1ab gene \ 2025 Virus
RPB0332 H1N1-F3 AGCAAGATGTTCAAGCCG Influenza A virus (H1N1) H1N1 \ 2025 Virus
RPB0332 H1N1-B3 CGTGGACTGGTGTATCTGAA Influenza A virus (H1N1) H1N1 \ 2025 Virus
RPB0333 S.au-F AGACTATTATTGGTTGATACACCTGAAACAA Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0333 S.au-R CACGTCCATATTTATCAGTTCTTTGACCTTT Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0333 S.au-P TGTAGAGAAATATGGTCCTGAAGCAAGTGCA\i6FAMdT\\idSp\\iBHQ1dT\ACGAAAAAAATGGTAG Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0334 MRSA-F AATAGCAATACAATCGCACATACATTAATAGAG Staphylococcus aureus mecA gene \ 2025 Bacterium
RPB0334 MRSA-R ATGAAGGTGTGCTTACAAGTGCTAATAATTCAC Staphylococcus aureus mecA gene \ 2025 Bacterium
RPB0334 MRSA-P CTGTTTGAGGGTGGATAGCAGTACCTGAGCCATAA\i6FAMdT\C\idSp\\iBHQ1dT\TTTTCATGTTGTTA Staphylococcus aureus mecA gene \ 2025 Bacterium
RPB0335 P.ae-F ACCAACAGAATAAGCACCGGCTAACTTCGTGCCAG Pseudomonas aeruginosa Ecf X \ 2025 Bacterium
RPB0335 P.ae-R TTCGCACCTCAGTGTCAGTATCAGTCCAGGTGGTC Pseudomonas aeruginosa Ecf X \ 2025 Bacterium
RPB0335 P.ae-P AGAACCGGCAGCATTTCGCGGATGTTGGAGA\i6FAMdT\\idSp\\iBHQ1dT\TTTTGTCAGCCAGCA Pseudomonas aeruginosa Ecf X \ 2025 Bacterium
RPB0336 K.pn-F TCGCCAGCGCTTCGCCTTCAACGTCTTCAGCG Klebsiella pneumoniae groEL \ 2025 Bacterium
RPB0336 K.pn-R TCGACCGCGGCTACCTGTCTCCGTACTTCATC Klebsiella pneumoniae groEL \ 2025 Bacterium
RPB0336 K.pn-P CTACACAGGAAATTCCACCACCCTCTACCG\i6FAMdT\\idSp\C\iBHQ1dT\CTAGCTCAGTAGTTTT Klebsiella pneumoniae groEL \ 2025 Bacterium
RPB0337 H.in-F ATCGCGAATCAGAATGTCGCGGTGAATACGTT Haemophilus influenzae 16srRNA \ 2025 Bacterium
RPB0337 H.in-R TCTCTCGTCTTCAGTAAGGAGGTGATCCAACC Haemophilus influenzae 16srRNA \ 2025 Bacterium
RPB0337 H.in-P TGGGAGTGGGTTGTACCAGAAGTAGA\i6FAMdT\AG\idSp\\iBHQ1dT\TAACCTTTTGGAGGGCGT Haemophilus influenzae 16srRNA \ 2025 Bacterium
RPB0338 N-F AGGCAGCAGTAGGGGAACTTCTCCTGCTAGAAT SARS-CoV-2 N gene \ 2024 Virus
RPB0338 N-R TTGGCCTTTACCAGACATTTTGCTCTCAAGCTG SARS-CoV-2 N gene \ 2024 Virus
RPB0339 RPA forward primer AAGGAAATTTTGGGGACCAGGAACTAATCAGA SARS-CoV-2 N gene \ 2024 Virus
RPB0339 RPA reverse primer ATCCAATTTGATGGCACCTGTGTAGGTCAAC SARS-CoV-2 N gene \ 2024 Virus
RPB0339 RT-primer1 TCTTTGAAATTTGGATCTTTGTC SARS-CoV-2 N gene \ 2024 Virus
RPB0339 RT-primer2 GAAATTTGGATCTTTGTC SARS-CoV-2 N gene \ 2024 Virus
RPB0339 RT-primer3 GTTGGTGGGAATGTTTTG SARS-CoV-2 N gene \ 2024 Virus
RPB0340 FP CCTACGGGTCTGTATCACGAGCAAGCGGC Bordetella pertussis CS IS1663 gene CP046995.1 2024 Bacterium
RPB0340 RP GCGTCTGTCCATAGCGAGCCAGCACGTAGC Bordetella pertussis CS IS1663 gene CP046995.1 2024 Bacterium