Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0296 AIV-NP-R TCCCAGGATTTCTGCTCTCTCGCACTTGAT Influenza A virus Nucleprotein (NP) gene MW265408.1 2024 Virus
RPB0297 KPC Forward primer ATCTCGGAAAAATATCTGACAACAGGCATGACGGTG Klebsiella pneumoniae KPC gene MT415074.1 2024 Bacterium
RPB0297 KPC Reverse primer CGGTCGTGTTTCCCTTTAGCCAATCAACAAAACTGCT Klebsiella pneumoniae KPC gene MT415074.1 2024 Bacterium
RPB0298 NDM Forward primer TCGCACCGAATGTCTGGCAGCACACTTCCTAT Klebsiella pneumoniae NDM gene NZ_QETJ01000331.1 2024 Bacterium
RPB0298 NDM Reverse primer GTTCGACAACGCATTGGCATAAGTCGCAATCC Klebsiella pneumoniae NDM gene NZ_QETJ01000331.1 2024 Bacterium
RPB0299 OXA Forward primer ATTATCGGAATGCCAGCGGTAGCAAAGGA Klebsiella pneumoniae OXA gene AM263454.1 2024 Bacterium
RPB0299 OXA Reverse primer TCGAGGGCGATCAAGCTATTGGGAATTTT Klebsiella pneumoniae OXA gene AM263454.1 2024 Bacterium
RPB0300 IMP Forward primer AGGCAGTATTTCCTCTCATTTTCATAGTGACAGC Klebsiella pneumoniae IMP gene HQ263342.1 2024 Bacterium
RPB0300 IMP Reverse primer ATTTTCCTTTCAGGCAGCCAAACTACTAGGTTAT Klebsiella pneumoniae IMP gene HQ263342.1 2024 Bacterium
RPB0301 VIM Forward primer GGGAGCCGAGTGGTGAGTATCCGACAGT Klebsiella pneumoniae VIM gene MT185944.1 2024 Bacterium
RPB0301 VIM Reverse primer TTTTCGCACCCCACGCTGTATCAATCAA Klebsiella pneumoniae VIM gene MT185944.1 2024 Bacterium
RPB0302 RPA-F GCCGTGCAATACAGTGATAACGCCGCCGCCA Klebsiella pneumoniae blaKPC gene \ 2024 Bacterium
RPB0302 RPA-R CAGCCAGTGCAGAGCCCAGTGTCAGTTTTTGTA Klebsiella pneumoniae blaKPC gene \ 2024 Bacterium
RPB0303 F [Biotin] TTTTTTTTTTGAAGAGACAGGTACGTTAATAGTTAATAGCGTA SARS-CoV-2 E gene \ 2024 Virus
RPB0303 R [Cy5] AAAAAGAAGGTTTTACAAGACTCACGTTAACsA SARS-CoV-2 E gene \ 2024 Virus
RPB0304 F [Biotin] TTTTTTTTTTACTCCAGGCAGCAGTAGGGGAACTTCTCCTGC SARS-CoV-2 N gene \ 2024 Virus
RPB0304 R [Cy5] AGTGACAGTTTGGCCTTGTTGTTGTTGGCCTT SARS-CoV-2 N gene \ 2024 Virus
RPB0305 F [Biotin] TTTTTTTTTTTATGCCATTAGTGCAAAGAATAGAGCTCGCAC SARS-CoV-2 RdRP gene \ 2024 Virus
RPB0305 R [Cy5] CAACCACCATAGAATTTGCTTGTTCCAATTAC SARS-CoV-2 RdRP gene \ 2024 Virus
RPB0306 F [Biotin] TTTTTTTTTTTATGTTACTTGGTTCCATGTTAT SARS-CoV-2 (Omicron) Omicron variant BA.1 NCCP 43408 2024 Virus
RPB0306 R [Cy5] ACTTCTCAATGGAAGCAAAATAAACA SARS-CoV-2 (Omicron) Omicron variant BA.1 NCCP 43408 2024 Virus
RPB0307 F [Biotin] TTTTTTTTTTTTGTTAATCTTATAACCAGAACTCAAT SARS-CoV-2 (Omicron) Omicron variant BA.2 NCCP 43412 2024 Virus
RPB0307 R [Cy5] AGAACAAGTCCTGAGTTGAATGTA SARS-CoV-2 (Omicron) Omicron variant BA.2 NCCP 43412 2024 Virus
RPB0308 F GATTATGGCTCAGGTACTGCTATCCACCCTC Staphylococcus aureus mecA gene \ 2025 Bacterium
RPB0308 R GCCAACCTTTACCATCGATTTTATAACTTG Staphylococcus aureus mecA gene \ 2025 Bacterium
RPB0309 F TCAGCTGATGCACAATCGTT SARS-CoV-2 orflab gene \ 2024 Virus
RPB0309 R GTCATCTTCGTCCTTTTCTTGGAAGC SARS-CoV-2 orflab gene \ 2024 Virus
RPB0310 F AACACAAGCTTTCGGCAG SARS-CoV-2 N gene \ 2024 Virus
RPB0310 R GAAATTTGGATCTTTGTCATCC SARS-CoV-2 N gene \ 2024 Virus
RPB0311 F CTTAGCATATGTAGTACAATTACCACTATA RSV A F gene \ 2024 Virus
RPB0311 R TACTTCACTTGGTAATGTTAAACTGTTCAT RSV A F gene \ 2024 Virus
RPB0312 F CAACAACCAATCCATTAATAAAACATGAGAAC Influenza A virus M1 gene \ 2024 Virus
RPB0312 R AAATTTTCAAGAAGATCATCCCTTAGACCAG Influenza A virus M1 gene \ 2024 Virus
RPB0313 F GATATACGTAATGTGTTGTCCTTGAGAGTG Influenza B virus NS1 gene \ 2024 Virus
RPB0313 R TAAGATCATCAGTAGCAACAAGTTTAGCAA Influenza B virus NS1 gene \ 2024 Virus
RPB0314 RPA-1-F GCATCACAAACAGATAACGGCGTAAATAGAAG Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0314 RPA-1-R ACATTAATTTAACCGTATCACCATCAATCGCT Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0315 F CTTGAAATTCCACGTAGGAATGTGGCAACTTTAC SARS-CoV-2 orflab gene \ 2024 Virus
RPB0315 R GTATGCCAGGTATGTCAACACATAAACCTTCAG SARS-CoV-2 orflab gene \ 2024 Virus
RPB0316 nuc-RPA-F GCATCACAAACAGATAACGGCGTAAATAGAAG Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0316 nuc-RPA-R ACATTAATTTAACCGTATCACCATCAATCGCT Staphylococcus aureus nuc gene \ 2025 Bacterium
RPB0317 khe-RAA-OF GGTTTACGTCTCAACCGGCTGGGGATCCAC Klebsiella pneumoniae khe gene \ 2024 Bacterium
RPB0317 khe-RAA-OR CTTCCTGCTCGGTGTTATTGAGAAAGGTGT Klebsiella pneumoniae khe gene \ 2024 Bacterium
RPB0318 KPC-RAA-OF CAGGACTTTGGCGGCTCCATCGGTGTGTAC Klebsiella pneumoniae blaKPC-2 gene \ 2024 Bacterium
RPB0318 KPC-RAA-OR CGTCATGCCTGTTGTCAGATATTTTTCCGAG Klebsiella pneumoniae blaKPC-2 gene \ 2024 Bacterium
RPB0319 NDM-RAA-OF GGTGGTGACTCACGCGCATCAGGACAAGATGG Klebsiella pneumoniae blaNDM-1gene \ 2024 Bacterium
RPB0319 NDM-RAA-OR GGGGTAAAATACCTTGAGCGGGCCAAAGTT Klebsiella pneumoniae blaNDM-1gene \ 2024 Bacterium
RPB0320 RPA-F- S. aureus GCATCACAAACAGATAACGGCGTAAATAGAAG Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0320 RPA-R- S. aureus ACATTAATTTAACCGTATCACCATCAATCGCT Staphylococcus aureus nuc gene \ 2024 Bacterium
RPB0321 speB-F CTTCTTCCGACTTGACGCACTAAACCCTTC Streptococcus pyogenes M1 GAS speB NZ_LS483338.1 2024 Bacterium