Pathogens

Target Pathogen Pathogen Name NCBI Taxonomy ID Order Family Genus Species Pathogen type
Influenza A virus (H3N2) Influenza A virus (H3N2) 119210 Articulavirales Orthomyxoviridae Alphainfluenzavirus Influenza A virus virus

Influenza A virus (H3N2)

NCBI Taxonomy ID:119210
PrimerBankID Target Gene Year of Publication
RPB0025 HA 2023
Nipah virus Nipah henipavirus 121791 Mononegavirales Paramyxoviridae Henipavirus Nipah virus Virus

Nipah virus

NCBI Taxonomy ID:121791
PrimerBankID Target Gene Year of Publication
RPB0352 N gene 2024
RPB0384 N gene 2023
RPB0443 Nucleocapsid protein (N) gene 2023
Streptococcus pyogenes M1 GAS Streptococcus pyogenes M1 GAS, Streptococcus pyogenes SF370, Streptococcus pyogenes ATCC 700294 160490 Lactobacillales Streptococcaceae Streptococcus Streptococcus pyogenes Bacterium

Streptococcus pyogenes M1 GAS

NCBI Taxonomy ID:160490
PrimerBankID Target Gene Year of Publication
RPB0244 sdaB gene 2024
RPB0321 speB 2024
HMPV Human metapneumovirus 162145 Mo\gavirales Pneumoviridae Metapneumovirus Human metapneumovirus Virus

HMPV

NCBI Taxonomy ID:162145
PrimerBankID Target Gene Year of Publication
RPB0094 N gene 2021
RPB0235 nucleoprotein (N) gene 2024
RPB0262 F 2025
HRV Human rhinovirus 169066 Picornavirales Picornaviridae Enterovirus Human rhinovirus Virus

HRV

NCBI Taxonomy ID:169066
PrimerBankID Target Gene Year of Publication
RPB0095 VP4 2022
RPB0364 VP4 gene 2023
HRSV A Human respiratory syncytial virus A, Respiratory syncytial virus group A 208893 Mononegavirales Pneumoviridae Orthopneumovirus Human orthopneumovirus Virus

HRSV A

NCBI Taxonomy ID:208893
PrimerBankID Target Gene Year of Publication
RPB0260 M 2025
RPB0347 \ 2024
RPB0424 \ 2023
HRSV B Human respiratory syncytial virus B, Respiratory syncytial virus group B 208895 Mononegavirales Pneumoviridae Orthopneumovirus Human orthopneumovirus Virus

HRSV B

NCBI Taxonomy ID:208895
PrimerBankID Target Gene Year of Publication
RPB0348 \ 2024
HCoV-NL63 Human coronavirus NL63, Coronavirus NL63, Human coronavirus NL 277944 Nidovirales Coronaviridae Alphacoronavirus Human coronavirus NL63 virus

HCoV-NL63

NCBI Taxonomy ID:277944
PrimerBankID Target Gene Year of Publication
RPB0008 \ 2023
RPB0093 N-gene 2022
RPB0258 ORF1ab 2025
HCoV-HKU1 Human coronavirus HKU1, CoV-HKU1 290028 Nidovirales Coronaviridae Betacoronavirus Human coronavirus HKU1 Virus

HCoV-HKU1

NCBI Taxonomy ID:290028
PrimerBankID Target Gene Year of Publication
RPB0259 ORF1ab 2025
Influenza A virus (H7N9) Influenza A virus (H7N9) 333278 Articulavirales Orthomyxoviridae Alphainfluenzavirus Influenza A virus Virus

Influenza A virus (H7N9)

NCBI Taxonomy ID:333278
PrimerBankID Target Gene Year of Publication
RPB0101 HA gene 2018
RPB0102 NA gene 2018