Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0080 blaOXA-51-R2B Biotin-AAATACTTCTGTGGTGGTTGCCTTATGGTGC Acinetobacter baumannii bla OXA-51 CP043953.1 2022 Bacterium
RPB0080 blaOXA-51-P FITC-AGCTATGGTAATGATCTTGCTCGTGCTTCGA[THF]CGAGGATGTAGCTGCT-C3 Spacer Acinetobacter baumannii bla OXA-51 CP043953.1 2022 Bacterium
RPB0081 blaOXA-23-F3 TGGTTCTCCAATCCGATCAGGGCATTCAACATT Acinetobacter baumannii bla OXA-23 NG_049525.1 2022 Bacterium
RPB0081 blaOXA-23-R2B Biotin-TTTACTTGCTATGTGGTTGCTTCTCTTTTTCTTTC Acinetobacter baumannii bla OXA-23 NG_049525.1 2022 Bacterium
RPB0081 blaOXA-23-P FITC-CTTGTACAATCTGACTCGAGGTTTCATTTA[THF]TACACTATGCTGTGC-C3 Spacer Acinetobacter baumannii bla OXA-23 NG_049525.1 2022 Bacterium
RPB0082 bla OXA-51-F2 ACATGACCCTAGGCGATGCCATGAAAGCTTCCGC Acinetobacter baumannii blaOXA-51 KJ584925.1 2020 Bacterium
RPB0082 bla OXA-51-R2 CTTGTAAGCAAACTGTGCCTCTTGCTGAGG Acinetobacter baumannii blaOXA-51 KJ584925.1 2020 Bacterium
RPB0082 bla OXA-51-P AAGCGTGTTGGTTATGGCAATGCAGATA[FAM-dT]C[THF]G[BHQ-dT]ACCCAAGTCGATA[C3-spacer] Acinetobacter baumannii blaOXA-51 KJ584925.1 2020 Bacterium
RPB0083 bla OXA-23-F GCAGTCCCAGTCTATCAGGAACTTGCGCGACG Acinetobacter baumannii bla OXA-23 NC_025109.1 2020 Bacterium
RPB0083 bla OXA-23-R GGCGTAACCTTTAATGGTCCTACCAACCAG Acinetobacter baumannii bla OXA-23 NC_025109.1 2020 Bacterium
RPB0083 bla OXA-23-P ATGCAAAAAGAAGTAAAACGTATTGGTT[FAM-dT]C[THF]G[BHQ-dT]AATGCTGAAATTG[C3-spacer] Acinetobacter baumannii bla OXA-23 NC_025109.1 2020 Bacterium
RPB0084 forward primer TAATACGACTCACTATAGGGGGTCCAACCTCCCACCCGTGTCTATC Aspergillus fumigatus \ \ 2022 Fungus
RPB0084 reverse primer TCGATGATTCACTGAATTCTGCAATTCACATTAC Aspergillus fumigatus \ \ 2022 Fungus
RPB0085 RT-RPA-F [Biotin]GGAGTTGTAGAGGTRAAGGACTCGGGYACTA Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0085 RT-RPA-R TCCGGCTTAGGGGCYCCTGGTGGYACATACAT Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0085 RT-RPA-P [FAM]AGGTTGGACACAAAAGTGAACTCRGCATCAA[dSpacer]GCGCATGTATGTTGA[C3-spacer] Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0086 CbF399 AAGGGCAATCCCGAGGGAAGTCTTAAATGA Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0086 CbR564 Biotin-CATACCATGGCTCTAAATGTAAATACATAA Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0086 Cbprobe408 FAM-CCCGAGGGAAGTCTTAAATGACCCCGTAAC-[THF]-ACTGATCCGAAAGGT-PO4 Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0087 EV71-F1 TGCCATTCATGTCACCTGCGAGTGCTTATC EV-A71 VP1 gene GQ279370.1 2018 Virus