Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0024 F CTGACTAAGGGAATTTTAGGATTTGTGTTC Influenza A virus (H1N1) M NC_026431.1 2023 virus
RPB0024 R GTATAGTTTAACTGCTCTATCCATGTTGTT Influenza A virus (H1N1) M NC_026431.1 2023 virus
RPB0024 P CCCTAAATGGGAATGGGGACCCGAACAACA[i6ROXdT]G[iBHQ1dT]A[idSp]AGAGCAGTTAAACTA[iSpC3] Influenza A virus (H1N1) M NC_026431.1 2023 virus
RPB0025 F GACACTAAAATAGATCTCTGGTCATACAAC Influenza A virus (H3N2) HA NC_026433.1 2023 virus
RPB0025 R CATCTCTGTATACATCATGGTCATAAGTTC Influenza A virus (H3N2) HA NC_026433.1 2023 virus
RPB0025 P GCCCTGGAGAACCAACATACAATTGATCTAAC[i6ROXdT]G[idSp]C[iBHQ1dT]CAGAAATGAACA[iSpC3] Influenza A virus (H3N2) HA NC_026433.1 2023 virus
RPB0026 F TATTAAATGAAAGCAATGCTAGTATGGGAA Influenza B virus PA NC_002206.1 2023 virus
RPB0026 R ATTTCATTTGGATTTTGTTTGTACCATTCA Influenza B virus PA NC_002206.1 2023 virus
RPB0026 P CACGGATGTTGTAACAGTTGTGACTT[i6CY3dT]CG[idSp]G[iBHQ1dT]TTAGTAGTACAGATCCTAG[iSpC3] Influenza B virus PA NC_002206.1 2023 virus
RPB0027 F TATGTGGAAAGGTTATGGCTGTAGTTGTGAT SARS-CoV-2 ORF1ab MN908947.3 2023 virus
RPB0027 R Bio-T*T*A*T*C*ATTGTAGATGTCAAAAGCCCTGTAT(*:phosphorothioate) SARS-CoV-2 ORF1ab MN908947.3 2023 virus
RPB0028 F CAAAAGATCACATTGGCACCCGCAATCCTG SARS-CoV-2 N MN908947.3 2023 virus
RPB0028 R Bio-T*C*T*T*G*AACTGTTGCGACTACGTGATGAGGAA(*:phosphorothioate) SARS-CoV-2 N MN908947.3 2023 virus
RPB0029 F ATGAGTCTTCTAACCGAGGTCGAAACGTAC Influenza A virus (H1N1) M1 \ 2023 virus
RPB0029 R Bio-G*G*T*G*A*GCGTGAACACAAATCCTAAAATCCC(*:phosphorothioate) Influenza A virus (H1N1) M1 \ 2023 virus
RPB0030 F CTAACAATCTTGATTCTAAGGTTGGTGG SARS-CoV-2 S(containing the L452R mutation site) NC_045512.2 2022 virus
RPB0030 R CTCTCTCAAAAGGTTTGAGATTAGA SARS-CoV-2 S(containing the L452R mutation site) NC_045512.2 2022 virus
RPB0031 F GCCATTTGTCATGATGGAAAAGCACACTTTCCT SARS-CoV-2 S NC_045512.2 2022 virus
RPB0031 R CTCATTGAGGCGGTCAATTTCTTTTTGAATGTT SARS-CoV-2 S NC_045512.2 2022 virus
RPB0032 F CTTGAAATTCCACGTAGGAATGTGGCAACTTTAC SARS-CoV-2 ORF1ab NC-045512.2 2022 virus