Primers

PrimerBankID Primer Name Sequence(5'-3') Target Pathogen Target Gene GenBank Year of Publication Pathogen type
RPB0083 bla OXA-23-P ATGCAAAAAGAAGTAAAACGTATTGGTT[FAM-dT]C[THF]G[BHQ-dT]AATGCTGAAATTG[C3-spacer] Acinetobacter baumannii bla OXA-23 NC_025109.1 2020 Bacterium
RPB0084 forward primer TAATACGACTCACTATAGGGGGTCCAACCTCCCACCCGTGTCTATC Aspergillus fumigatus \ \ 2022 Fungus
RPB0084 reverse primer TCGATGATTCACTGAATTCTGCAATTCACATTAC Aspergillus fumigatus \ \ 2022 Fungus
RPB0085 RT-RPA-F [Biotin]GGAGTTGTAGAGGTRAAGGACTCGGGYACTA Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0085 RT-RPA-R TCCGGCTTAGGGGCYCCTGGTGGYACATACAT Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0085 RT-RPA-P [FAM]AGGTTGGACACAAAAGTGAACTCRGCATCAA[dSpacer]GCGCATGTATGTTGA[C3-spacer] Coxsackievirus A6 VP1 gene \ 2021 Viruses
RPB0086 CbF399 AAGGGCAATCCCGAGGGAAGTCTTAAATGA Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0086 CbR564 Biotin-CATACCATGGCTCTAAATGTAAATACATAA Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0086 Cbprobe408 FAM-CCCGAGGGAAGTCTTAAATGACCCCGTAAC-[THF]-ACTGATCCGAAAGGT-PO4 Coxiella burnetii  23S rRNA gene AE016828 2018 Bacterium
RPB0087 EV71-F1 TGCCATTCATGTCACCTGCGAGTGCTTATC EV-A71 VP1 gene GQ279370.1 2018 Virus